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The map label for this gene is rz [H]

Identifier: 218689836

GI number: 218689836

Start: 2050592

End: 2051086

Strand: Reverse

Name: rz [H]

Synonym: ECED1_2105

Alternate gene names: 218689836

Gene position: 2051086-2050592 (Counterclockwise)

Preceding gene: 218689837

Following gene: 218689835

Centisome position: 39.37

GC content: 55.56

Gene sequence:

>495_bases
ATGAACCGCGTACTGTGCGTGGTCATCATTGCCCTGCTGGTGGCCTGTGGTGCGCTTAGTCTGGGGCTGAATCATTACCG
CGATAACGCCATCACTTACAAAGCGCAGCGCGATAAAAAAGCCAGAGAGCTGGAGCAGGCAAATGCAACCATTACTGATA
TGCAGCAGCGCCAGCGTGATGTTGCTGCACTTGATGCCAGATACTCGAGGGAATTAGCCGATGCGAGAGCTGAAAATGAA
ACTCTGCGCGCTGACGTTGCCGCTGGTCGTAAGCGCCTGCGGATCAACGCCACCTGCCCCGGTACCGTGCGTGAAGCCAC
CGGCACCTCCGGCGTGGATAATGCAACCGGCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACTCTCAGAGAGC
GGTTGATGCTGATGCAGAAGCAGCTGGAAGGGGCGCAGGAATATATCCGCACTCAGTGCACTAAGCTGGCTTTTTATTAT
CCGGAGGATATATGA

Upstream 100 bases:

>100_bases
ATGGCTGAAAAATTATCCACCTGGAAGTTCATTCTTATCTGGCTGGTGTTTGTGATTATGGCCTCCGGTTATTTCATCGG
TCAGATACGCTGGTGGTGAA

Downstream 100 bases:

>100_bases
AGAAATTACGGGTAACCGTAGAACCTTTTCAGGGAACAATTCCGTTCCGTATTTTGCAGCGTGGTCGTGTTCTTGTTGAA
GGTTCGTTCAGTGGTAAATG

Product: Endopeptidase (Lysis protein) from bacteriophage origin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKKARELEQANATITDMQQRQRDVAALDARYSRELADARAENE
TLRADVAAGRKRLRINATCPGTVREATGTSGVDNATGPRLADTAERDYFTLRERLMLMQKQLEGAQEYIRTQCTKLAFYY
PEDI

Sequences:

>Translated_164_residues
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKKARELEQANATITDMQQRQRDVAALDARYSRELADARAENE
TLRADVAAGRKRLRINATCPGTVREATGTSGVDNATGPRLADTAERDYFTLRERLMLMQKQLEGAQEYIRTQCTKLAFYY
PEDI
>Mature_164_residues
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKKARELEQANATITDMQQRQRDVAALDARYSRELADARAENE
TLRADVAAGRKRLRINATCPGTVREATGTSGVDNATGPRLADTAERDYFTLRERLMLMQKQLEGAQEYIRTQCTKLAFYY
PEDI

Specific function: Necessary for host cell lysis. It is believed to code for an endopeptidase that cleaves the amino-carboxyl cross-link between the diaminopimelic acid and D-alanine residues in the murein component of the bacterial cell wall [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786769, Length=153, Percent_Identity=67.9738562091503, Blast_Score=204, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004929 [H]

Pfam domain/function: PF03245 Phage_lysis [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 18442; Mature: 18442

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKKARELEQANATITDMQQRQRD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHH
VAALDARYSRELADARAENETLRADVAAGRKRLRINATCPGTVREATGTSGVDNATGPRL
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCC
ADTAERDYFTLRERLMLMQKQLEGAQEYIRTQCTKLAFYYPEDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
>Mature Secondary Structure
MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKAQRDKKARELEQANATITDMQQRQRD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHH
VAALDARYSRELADARAENETLRADVAAGRKRLRINATCPGTVREATGTSGVDNATGPRL
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCC
ADTAERDYFTLRERLMLMQKQLEGAQEYIRTQCTKLAFYYPEDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]