Click here to switch to the map view.

The map label for this gene is 218689825

Identifier: 218689825

GI number: 218689825

Start: 2041982

End: 2042335

Strand: Reverse

Name: 218689825

Synonym: ECED1_2094

Alternate gene names: NA

Gene position: 2042335-2041982 (Counterclockwise)

Preceding gene: 218689826

Following gene: 218689824

Centisome position: 39.2

GC content: 58.47

Gene sequence:

>354_bases
ATGCGTGATTTTCAGAATGCCTTTGATGCTGCCCTCGCCGGGGTGGACAGTACGATCGTTGAAGTGATGGGGATCCGTGC
GCAGTTCACCTCCGGAGCACAACGTGGCGGCGAAGTTCAGGGGGTTTTTGACGATCCGGAGTCGCTGGGTTTTGCCGGTG
GCGGGGTCCGTATTGAAGGAAGCAGCCCGTCATTATTTGTGCGGACGGATACGGTGCGTGCCGTGCGGCGTGGTGACACG
CTGACCATTAACGGCGAGATGTTCTGGGTGGATCGTGTTTCTCCGGATGACGGGGGAAGCTGTTATCTCTGGCTCAACCG
TGGGCAACCACCCGCTGTTAACCGGCGACGATAA

Upstream 100 bases:

>100_bases
CCGGAGACAGGTCGTCCCGTTGAGCTGGCGTTACGGGGTATGCGTGTTCTGGTGCCATCATCACTGGCAACGGCCATGAT
ACAGCACGGAACGGCTGAAT

Downstream 100 bases:

>100_bases
ACGCAGGGTGAAATTATGGCGATAAAAGGGCTTGATCAGGCGATTGATAATCTGAGCCGGGTTCGTAAAAACGCCATTCC
GGCGGCTTCAGCAATGACGA

Product: tail attachment protein

Products: NA

Alternate protein names: Gifsy-1 Prophage Minor Capsid Protein FII; Minor Capsid Protein

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MRDFQNAFDAALAGVDSTIVEVMGIRAQFTSGAQRGGEVQGVFDDPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDT
LTINGEMFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR

Sequences:

>Translated_117_residues
MRDFQNAFDAALAGVDSTIVEVMGIRAQFTSGAQRGGEVQGVFDDPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDT
LTINGEMFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR
>Mature_117_residues
MRDFQNAFDAALAGVDSTIVEVMGIRAQFTSGAQRGGEVQGVFDDPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDT
LTINGEMFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12667; Mature: 12667

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDFQNAFDAALAGVDSTIVEVMGIRAQFTSGAQRGGEVQGVFDDPESLGFAGGGVRIEG
CCCHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCCEEEEEECCHHHCCCCCCCEEEEC
SSPSLFVRTDTVRAVRRGDTLTINGEMFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR
CCCEEEEEECHHHHHHCCCEEEECCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRDFQNAFDAALAGVDSTIVEVMGIRAQFTSGAQRGGEVQGVFDDPESLGFAGGGVRIEG
CCCHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCCEEEEEECCHHHCCCCCCCEEEEC
SSPSLFVRTDTVRAVRRGDTLTINGEMFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR
CCCEEEEEECHHHHHHCCCEEEECCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA