Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is 218689818
Identifier: 218689818
GI number: 218689818
Start: 2036474
End: 2036803
Strand: Reverse
Name: 218689818
Synonym: ECED1_2087
Alternate gene names: NA
Gene position: 2036803-2036474 (Counterclockwise)
Preceding gene: 218689819
Following gene: 218689816
Centisome position: 39.1
GC content: 56.97
Gene sequence:
>330_bases ATGAAAACCTTTCGCTGGAAAGTGAAACCGGATATGGAGGTGAACTCGCAGCCATCGGTGCGTGAAGTGCGTTTTGGTGA CGGGTACTCACAGCGTATGGCGGCAGGGCTGAATGCTGACCTGAAAACATACCGGGTGATGCTTTCCGTGACCCGGGAGG AGGCCCGTCATCTGGAAGCGTTCCTGGCAGAGCACGGTGGCTGGAAGGCATTTTTGTGGAAGCCACCCTATGCATACCGG CAGATAAAGGTGACCTGTGCCGGGTGGTCTGCGCGGGTCGGGATGTTGCGCGTTGAGTTCAGCGCGGAGTTTAAGCAGGT GGTGAACTGA
Upstream 100 bases:
>100_bases CGCAGCTGATGAAAGCGGTGTATGAGATGGCCCGTAAAGGTGCGCAGGATGAGCTCCGGCTGCAGTTGCGTGATGGCGGT CTGTTATCGGGGAGCGGGCG
Downstream 100 bases:
>100_bases TGCAGGATATTCACGAAGAAAGTCTGAACGAGTCGGTTAAATCAGAGCAGTCACCGCGGGTGGTGCTCTGGGAAATCGAC CTGACGGTACAGGGCGGTGA
Product: minor tail protein M
Products: NA
Alternate protein names: Phage Minor Tail Protein; Minor Tail Protein M; Gifsy-1 Prophage VmtM; Gifsy-2 Prophage Minor Tail Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVMLSVTREEARHLEAFLAEHGGWKAFLWKPPYAYR QIKVTCAGWSARVGMLRVEFSAEFKQVVN
Sequences:
>Translated_109_residues MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVMLSVTREEARHLEAFLAEHGGWKAFLWKPPYAYR QIKVTCAGWSARVGMLRVEFSAEFKQVVN >Mature_109_residues MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVMLSVTREEARHLEAFLAEHGGWKAFLWKPPYAYR QIKVTCAGWSARVGMLRVEFSAEFKQVVN
Specific function: Unknown
COG id: COG4718
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12645; Mature: 12645
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVMLSVTREEARHLEA CCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FLAEHGGWKAFLWKPPYAYRQIKVTCAGWSARVGMLRVEFSAEFKQVVN HHHHCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEECHHHHHHCC >Mature Secondary Structure MKTFRWKVKPDMEVNSQPSVREVRFGDGYSQRMAAGLNADLKTYRVMLSVTREEARHLEA CCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FLAEHGGWKAFLWKPPYAYRQIKVTCAGWSARVGMLRVEFSAEFKQVVN HHHHCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA