Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is 218689815
Identifier: 218689815
GI number: 218689815
Start: 2035022
End: 2036026
Strand: Reverse
Name: 218689815
Synonym: ECED1_2084
Alternate gene names: NA
Gene position: 2036026-2035022 (Counterclockwise)
Preceding gene: 218689816
Following gene: 218689814
Centisome position: 39.08
GC content: 57.61
Gene sequence:
>1005_bases TTGTGCTGGCCACACCGACGGAGACGGACGGGGCGCTGTTTCCCGGTCGTATCATGCTGGCGAACACCTGTATGTGGACC TACCGCTCTGATGAGTGTGGTTACACGGGCGGGGCTGTGGCGGATGAGTTCGATAAACCCACCACCGATATCCGTAAGGA CAGATGCAGCAAGTGCATGCGCGGGTGTGAACTGCGCAGGAATGTCGGCAATTTTGGCGGTTTCCTTTCCATTAATAAAC TTTCGCAGTAAATCCCGGTTTATGACACAGACTGAATCAGCGATTCTGGCGCATGCCCGGCGGTGTGCGCCTGCGGAGTC GTGCGGCTTCGTGATAAGCACGCCGGAGGGGGAGCGGTATATCCCTTGTGTGAATATTTCCGCAGAGCCGGAGGCGTATT TTCGTATCGCACCGGAAGACTGGCTGCGGGCAGAGATGCAGGGGGAGATTGTGGCACTGGTCCACAGTCATCCCGGTGGG CTGCCCTGGCTGAGCGAGGCTGACCGGCGGCTGCAGATAAAAAGCGCACTGCCCTGGTGGCTGGTCAGCCGGGGTGACAT TCACAAATTCCGCTGTGTGCCACACCTGACGGGACGGCGCTTTGAGCACGGTGTGACGGACTGTTACACCCTGTTCCGGG ATGCATACCATCTGGCGGGGACTGAAATGCCGGATTTTCATCGCGAGGATGACTGGTGGCGCAACGGCCAGAACCTGTAC CTGGATAATCTGGAGGCCACAGGGCTGTATCAGGTGCCGTTGTCATCAGCACAACCGGGCGATGTGCTGCTGTGCTGTTT TGGTTCATCGGTGCCGAATCATGCCGCCATTTACTGTGGTGATGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGTA AACGGGAGAGGTATTCCGAAAAATGGCAACGACGAACGCATTCTGTCTGGCGTCACCGCCACTGGCACGCATCTGCCTTC ACGGGGATTTACAACGATTTGGCCGCCGCCTCAGCCTGTATGTGA
Upstream 100 bases:
>100_bases AATTTCGTTGCGGGCAATCCGGAAGCGGACCCGGAGCAGGAGCTGAGTGACCGCTGGGTGGTGGAGCAGATGTCGCAGCT GACAGCCATGACGGCCTCGT
Downstream 100 bases:
>100_bases ACACGGCAGCGGAAGCCATCCGCGCCCTGTCGATGCAGATGCCGGGCTTTCGCCGTCAGATGAACGAAGGCTGGTACCAG ATACGTATTGCCGGTGAGGA
Product: tail fiber component K
Products: NA
Alternate protein names: Tail Assembly Protein; Tail Assembly Protein K; Phage Minor Tail Protein; Phage Tail Assembly Protein; Prophage LambdaSo Tail Assembly Protein K; Phage Protein; Gifsy-2 Prophage Tail Assembly Protein; Prophage LambdaSo Minor Tail Protein L; Tail Fiber Component K Of Prophage; Phage-Related Tail Assembly Protein K; Phage Tail Protein; Metal-Dependent Protease; Tail Assembly Protein K-Like; Tail Fiber Component K; Tail Fiber Component; NlpC/P60 Family Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MCWPHRRRRTGRCFPVVSCWRTPVCGPTALMSVVTRAGLWRMSSINPPPISVRTDAASACAGVNCAGMSAILAVSFPLIN FRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGG LPWLSEADRRLQIKSALPWWLVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY LDNLEATGLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYSEKWQRRTHSVWRHRHWHASAF TGIYNDLAAASACM
Sequences:
>Translated_334_residues MCWPHRRRRTGRCFPVVSCWRTPVCGPTALMSVVTRAGLWRMSSINPPPISVRTDAASACAGVNCAGMSAILAVSFPLIN FRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGG LPWLSEADRRLQIKSALPWWLVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY LDNLEATGLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYSEKWQRRTHSVWRHRHWHASAF TGIYNDLAAASACM >Mature_334_residues MCWPHRRRRTGRCFPVVSCWRTPVCGPTALMSVVTRAGLWRMSSINPPPISVRTDAASACAGVNCAGMSAILAVSFPLIN FRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGG LPWLSEADRRLQIKSALPWWLVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY LDNLEATGLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYSEKWQRRTHSVWRHRHWHASAF TGIYNDLAAASACM
Specific function: Unknown
COG id: COG1310
COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37704; Mature: 37704
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCWPHRRRRTGRCFPVVSCWRTPVCGPTALMSVVTRAGLWRMSSINPPPISVRTDAASAC CCCCCCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHCCEEECCCCCCCCEEECCCHHHH AGVNCAGMSAILAVSFPLINFRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERY CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCEE IPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALPWW EEEEECCCCCCEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCEEEECCCCCEE LVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY EECCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEE LDNLEATGLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYSE EECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH KWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCWPHRRRRTGRCFPVVSCWRTPVCGPTALMSVVTRAGLWRMSSINPPPISVRTDAASAC CCCCCCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHCCEEECCCCCCCCEEECCCHHHH AGVNCAGMSAILAVSFPLINFRSKSRFMTQTESAILAHARRCAPAESCGFVISTPEGERY CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCCCEE IPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALPWW EEEEECCCCCCEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCEEEECCCCCEE LVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY EECCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEE LDNLEATGLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYSE EECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH KWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA