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The map label for this gene is ydhS [H]

Identifier: 218689611

GI number: 218689611

Start: 1824623

End: 1826227

Strand: Direct

Name: ydhS [H]

Synonym: ECED1_1866

Alternate gene names: 218689611

Gene position: 1824623-1826227 (Clockwise)

Preceding gene: 218689610

Following gene: 218689618

Centisome position: 35.02

GC content: 47.41

Gene sequence:

>1605_bases
ATGAAAACAATTGCTATTGTGGGTGCCGGGCCTACGGGGATCTACACCTTATTCTCGCTTCTACAGCAACAAACGCCACT
TTCTATTTCTATCTTCGAGCAGGCTGACGAAGCCGGTGTCGGGATGCCATACAGTGATGATGAAAACTCAAAACTGATGC
TGGCAAACATTGCCAGTATTGAAATACCGCCGATTTATTGCACGTATCTCGAATGGCTACAAAAGCAAGAAGCCAGCCAT
CTCCAGCGTTATGGCGTTAAAAAAGAAACCTTGCACGATCGTCAGTTTTTACCGCGAATTCTGCTGGGCGAATATTTCCG
CGATCAATTTTTACGATTAGTAGACCAGGCACGACAGCAAAAATTTGCAGTGGCTGTTTATGAATCATGCCAGGTTACCG
ATCTGCAAATTACAAATGCTGGCGTCATGATCGCTACAAATCAGGATTTACCCAGCGAGACGTTTGATTTAGCGGTGATT
GCCACGGGTCACGTCTGGCCTGATGAAGAAGAAGCAACCAGAACGTATTTTCCCAGCCCGTGGTCAGGCCTGATGGAAGC
AAAGGTCGATGCGTGTAACGTGGGTATTATGGGAACATCCTTGAGCGGACTGGATGCGGCAATGGCAGTGGCTATTCAGC
ATGGTTCGTTCATTGAAGATGATAAACAACACGTCATTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATTACGTTA
ATGTCGCGCACAGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACTGATCA
AGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGTATTTAGATTGATAGTAGAGGAAATCAAAT
TTGCTGATCCAGACTGGAGCCAACGCATAGCCTTAGAAAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAG
CGCAAACAACGCGACCCATTCGACTGGGCAGAAAAAAATCTCCAGGAGGTCGAACGCAATAAACGAGAAAATCATACTGT
TCCCTGGCGTTATGTCATTCTGCGCCTGCATGAAGCCGTACAGGAAATTGTTCCACATCTGAATGAACACGACCATAAAC
GGTTCAGTAAAGGCCTTGCCCGGGTTTTCATCGATAATTATGCGGCAATCCCTTCAGAGTCTATTCGTCGACTATTGGCC
TTACGTGAAGCGGGAATCATTCATATTCTCGCTCTCGGTGAAGACTACGAAATGGAAATTAACGAGTCGCGCACCGTCCT
GAAAACGGAAGACAACAGTTACTCGTTTGACGTTTTTATTGATGCCCGCGGGCAGCGTCCGCTTAAAGTGAAAGATATTC
CTTTCCCTGGACTACGCGAACAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAA
CCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGCCCTGGTTGATGCACGACCAGCCTTTCGTTCAGGGACTTAC
GGCATGTGCAGAAATTGGAGAGGCGATGGCTCGGGCGGTCGTAAAACCTGCATCCCGTGCGCGTCGGCGTCTTTCGTTTG
ATTAA

Upstream 100 bases:

>100_bases
GCCCTTTTCATCCCTGTCTGAAATTTCTCAAATTCTAAAAATCTCAACCAAACTTACCTGATAACACTAAATTCGAAAGA
ATGCGTACAGGTAAGTAACA

Downstream 100 bases:

>100_bases
AGGTAAAGCTATCAGCACTCAACAAACTGATGTTGTTCATTAAGACGATAGCGGACTCCGGCTCGAATATTGTTTTCACC
TTCAATGGCGACGGCGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MKTIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDDENSKLMLANIASIEIPPIYCTYLEWLQKQEASH
LQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMIATNQDLPSETFDLAVI
ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITL
MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAE
RKQRDPFDWAEKNLQEVERNKRENHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLA
LREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ
PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD

Sequences:

>Translated_534_residues
MKTIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDDENSKLMLANIASIEIPPIYCTYLEWLQKQEASH
LQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMIATNQDLPSETFDLAVI
ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITL
MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAE
RKQRDPFDWAEKNLQEVERNKRENHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLA
LREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ
PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>Mature_534_residues
MKTIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDDENSKLMLANIASIEIPPIYCTYLEWLQKQEASH
LQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMIATNQDLPSETFDLAVI
ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITL
MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAE
RKQRDPFDWAEKNLQEVERNKRENHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLA
LREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ
PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD

Specific function: Unknown

COG id: COG4529

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787957, Length=534, Percent_Identity=98.314606741573, Blast_Score=1092, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60672; Mature: 60672

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDDENSKLMLANIASI
CCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECEE
EIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQ
ECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFAVAVYESCQVTDLQITNAGVMIATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSP
HEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
WSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITL
HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEE
MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWS
EECCCCCCCCCCCCCCCCCCCEEECCHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHH
QRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKRENHTVPWRYVILRLHEAV
HHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEI
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEE
NESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ
CCCCEEEEECCCCEEEEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
CCCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
>Mature Secondary Structure
MKTIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDDENSKLMLANIASI
CCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECEE
EIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQ
ECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFAVAVYESCQVTDLQITNAGVMIATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSP
HEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
WSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITL
HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEE
MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWS
EECCCCCCCCCCCCCCCCCCCEEECCHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHH
QRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKRENHTVPWRYVILRLHEAV
HHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEI
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEE
NESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ
CCCCEEEEECCCCEEEEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
CCCCCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023191; 9278503 [H]