| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218689383
Identifier: 218689383
GI number: 218689383
Start: 1593543
End: 1594328
Strand: Direct
Name: 218689383
Synonym: ECED1_1612
Alternate gene names: NA
Gene position: 1593543-1594328 (Clockwise)
Preceding gene: 218689382
Following gene: 218689384
Centisome position: 30.59
GC content: 27.61
Gene sequence:
>786_bases ATGCTGCAAGCTATAAAAAAAATCATAATAATGACAATCGTAAATATTATATTTTTCTATTCCTTTCAATCGACTGCGGA TGAAATGGTTTTAATAAAAAAATACGGGTTTGGGCTTGAGAGAGATATCAAAGGAAGGCCATTAATTTATCCTATCGAAA ATTATGATGAGTGTAAGAAAAAATGCAATCATATGAATTATATAGCGGATGTCAATGCTCAATTAGCTATGAGTAAAAAA AATAACAGGATTTTTGCTAACATAACCTTTACTAACAATAGCTCTACCACGTATTTTTTTTCTAAATATTATCTACCTAT GAAAGTAAAAGATGGAAAAGGAGATGAATATGATGCGATATGCAAAAAACCATTCAGAATCAACTCTGGGAATATCACGT TGGACTACTTAGGTGGTTCATGTCCTTTTGAAATTAATACGAACCCTGAACGGTGGAATACTATTAAACCAGGTCGTAGT TTTTTGTTGAGTATAACCTTAAATGATATATATGCCTTTATACCAGGAGATAATTATTATTTTATAAAATCATCTGGCTA TAAATTTGTTAATGACAAGTGGTTTACACTCAAATCAATCAATAATATTTTTCTTTATTTTTTAAATTTAAAAATTAATT GTGCTGATGATTTTTTTGATATTAATAATTTTACTACATGTAATAATTTGTTATTAGATGAAAAAAACACTTTTTTATTA ATCAGTTATGGGCAATTGAGGATGAAAAAAATTCTATTTACGTCACCCCTGATGAAATTTCTATAA
Upstream 100 bases:
>100_bases ACTCGATTGATGATGAAATATTAAGCAATTCAGTTAAGAAAAAAATAGCGGAATTAGAAAAAGCACTTCTCCATTAACTA ATAAGTCGAGAAATACATTA
Downstream 100 bases:
>100_bases GTATAGACGGCGATAACTTAAAGTTGCCATATTAGGAATATGGGAAAGAACACGGTGCGCCGCTTTTTTGCACTAAATAA TTTACATTTTATGTTCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLQAIKKIIIMTIVNIIFFYSFQSTADEMVLIKKYGFGLERDIKGRPLIYPIENYDECKKKCNHMNYIADVNAQLAMSKK NNRIFANITFTNNSSTTYFFSKYYLPMKVKDGKGDEYDAICKKPFRINSGNITLDYLGGSCPFEINTNPERWNTIKPGRS FLLSITLNDIYAFIPGDNYYFIKSSGYKFVNDKWFTLKSINNIFLYFLNLKINCADDFFDINNFTTCNNLLLDEKNTFLL ISYGQLRMKKILFTSPLMKFL
Sequences:
>Translated_261_residues MLQAIKKIIIMTIVNIIFFYSFQSTADEMVLIKKYGFGLERDIKGRPLIYPIENYDECKKKCNHMNYIADVNAQLAMSKK NNRIFANITFTNNSSTTYFFSKYYLPMKVKDGKGDEYDAICKKPFRINSGNITLDYLGGSCPFEINTNPERWNTIKPGRS FLLSITLNDIYAFIPGDNYYFIKSSGYKFVNDKWFTLKSINNIFLYFLNLKINCADDFFDINNFTTCNNLLLDEKNTFLL ISYGQLRMKKILFTSPLMKFL >Mature_261_residues MLQAIKKIIIMTIVNIIFFYSFQSTADEMVLIKKYGFGLERDIKGRPLIYPIENYDECKKKCNHMNYIADVNAQLAMSKK NNRIFANITFTNNSSTTYFFSKYYLPMKVKDGKGDEYDAICKKPFRINSGNITLDYLGGSCPFEINTNPERWNTIKPGRS FLLSITLNDIYAFIPGDNYYFIKSSGYKFVNDKWFTLKSINNIFLYFLNLKINCADDFFDINNFTTCNNLLLDEKNTFLL ISYGQLRMKKILFTSPLMKFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30485; Mature: 30485
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQAIKKIIIMTIVNIIFFYSFQSTADEMVLIKKYGFGLERDIKGRPLIYPIENYDECKK CHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHH KCNHMNYIADVNAQLAMSKKNNRIFANITFTNNSSTTYFFSKYYLPMKVKDGKGDEYDAI HHCCCCEEEECCEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCHHH CKKPFRINSGNITLDYLGGSCPFEINTNPERWNTIKPGRSFLLSITLNDIYAFIPGDNYY HCCCEEECCCCEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEE FIKSSGYKFVNDKWFTLKSINNIFLYFLNLKINCADDFFDINNFTTCNNLLLDEKNTFLL EEECCCCEEECCCEEEEECCCEEEEEEEEEEEEECCCEEECCCCCCCCCEEEECCCCEEE ISYGQLRMKKILFTSPLMKFL EECCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MLQAIKKIIIMTIVNIIFFYSFQSTADEMVLIKKYGFGLERDIKGRPLIYPIENYDECKK CHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHH KCNHMNYIADVNAQLAMSKKNNRIFANITFTNNSSTTYFFSKYYLPMKVKDGKGDEYDAI HHCCCCEEEECCEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCHHH CKKPFRINSGNITLDYLGGSCPFEINTNPERWNTIKPGRSFLLSITLNDIYAFIPGDNYY HCCCEEECCCCEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEE FIKSSGYKFVNDKWFTLKSINNIFLYFLNLKINCADDFFDINNFTTCNNLLLDEKNTFLL EEECCCCEEECCCEEEEECCCEEEEEEEEEEEEECCCEEECCCCCCCCCEEEECCCCEEE ISYGQLRMKKILFTSPLMKFL EECCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA