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The map label for this gene is ydbC [H]

Identifier: 218689345

GI number: 218689345

Start: 1549428

End: 1550294

Strand: Direct

Name: ydbC [H]

Synonym: ECED1_1569

Alternate gene names: 218689345

Gene position: 1549428-1550294 (Clockwise)

Preceding gene: 218689344

Following gene: 218689347

Centisome position: 29.74

GC content: 53.63

Gene sequence:

>867_bases
ATGAGCAGCAACACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCTGGTCCTGG
GGTTTTTGGCCCCCCAAGAGATCGCCACGTCGCTATAACCGTGCTGCGCGAGGCGCTGGCATTGGGCGTCAATCATATTG
ATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACA
ATTGTCACTAAAATTGGTGCGCGGCGTGGAGAGGACGCTTCCTGGTTACCCGCATTTTCTCCGGCAGAGCTGCAAAAAGC
GGTACACGATAATCTACGTAATCTCGGCCTGGACGTACTGGATGTGGTTAACCTGCGCGTTATGATGGGGGATGGTCATG
GCCCAGCGGAAGGATCGATTGAGGCCAGCCTGACAGTGCTGGCGGAGATGCAACAACAAGGCCTGGTAAAACATATTGGC
CTGAGTAACGTCACACCGACGCAGGTTGCAGAGGCGCGAAAGATTGCCGAAATCGTCTGCGTGCAGAACGAATACAACAT
TGCCCACCGTGCTGATGACGCAATGATTGATGCTTTGGCTCGTGATGGCATTGCCTACGTGCCATTCTTTCCGCTCGGGG
GCTTTACGCCGCTGCAATCCTCCACGCTTTCCGATGTTGCTACAAGCCTTAATGCGACACCAATGCAGGTGGCGCTGGCG
TGGCTGTTACAGCGTTCACCGAATATTTTGCTGATTCCTGGCACCTCTTCGGTGGGGCATCTGCGGGAGAATATGGCGTC
CGATGAATTAGTGCTAACGGATGACGTGCTGGCAACGCTGGACAGTATTGCGCAAAAGGCGGGTTAA

Upstream 100 bases:

>100_bases
ACAACTCATCCCGCAATCTTGTTTACACCCTCGCATTATTTATCTCTTTTCGTTTCTATACTGATTTTTCTTAATCGGTT
TTATTACAGGGCAGGGTGCG

Downstream 100 bases:

>100_bases
ATAAAAAAACCTCCCACTTTCGTGGGAGGCATCATAAATCTTATGCAGCAACAATACTGTCGATGGCTGCTTTCGCGTCA
GACTGCGCTTTCGCTGCCAT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLT
IVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIG
LSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVATSLNATPMQVALA
WLLQRSPNILLIPGTSSVGHLRENMASDELVLTDDVLATLDSIAQKAG

Sequences:

>Translated_288_residues
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLT
IVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIG
LSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVATSLNATPMQVALA
WLLQRSPNILLIPGTSSVGHLRENMASDELVLTDDVLATLDSIAQKAG
>Mature_287_residues
SSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTI
VTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGL
SNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVATSLNATPMQVALAW
LLQRSPNILLIPGTSSVGHLRENMASDELVLTDDVLATLDSIAQKAG

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=286, Percent_Identity=94.4055944055944, Blast_Score=556, Evalue=1e-160,
Organism=Escherichia coli, GI87081735, Length=317, Percent_Identity=27.7602523659306, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1788070, Length=309, Percent_Identity=25.5663430420712, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1786400, Length=254, Percent_Identity=27.1653543307087, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788081, Length=261, Percent_Identity=23.3716475095785, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30847; Mature: 30715

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG
CCCCEEEECCHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVL
CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
DVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVC
HHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHE
VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVATSLNATPMQVALA
ECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
WLLQRSPNILLIPGTSSVGHLRENMASDELVLTDDVLATLDSIAQKAG
HHHHCCCCEEEEECCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG
CCCEEEECCHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVL
CHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
DVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVC
HHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHE
VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVATSLNATPMQVALA
ECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
WLLQRSPNILLIPGTSSVGHLRENMASDELVLTDDVLATLDSIAQKAG
HHHHCCCCEEEEECCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]