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The map label for this gene is ldrB [H]

Identifier: 218689163

GI number: 218689163

Start: 1351568

End: 1351675

Strand: Reverse

Name: ldrB [H]

Synonym: ECED1_1364

Alternate gene names: 218689163

Gene position: 1351675-1351568 (Counterclockwise)

Preceding gene: 218689164

Following gene: 218689156

Centisome position: 25.95

GC content: 56.48

Gene sequence:

>108_bases
ATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCAGCACCGATCCTTGCGGGAATTATTACCGCAGCGAT
TGTCGGCTGGTGGCGTAACCGGAAGTAA

Upstream 100 bases:

>100_bases
ACGTTGAGAGGTATAACCTGACAACAGAACGGGGGCTAATCTTGAACCAGAACAATTCAAGAATAGCCGCAAAATGTTGT
CATTACAACAAGGCGGCTAT

Downstream 100 bases:

>100_bases
GGTGAAAACGGGCGTCAGGCTGCCGTGATGGCAATATGCGCCCGAAACCGGCCGCAGGGGTAACAGCCTGCGGCCTTTTT
TGTATCCGGCACCCATGAAA

Product: toxic polypeptide, small

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 35; Mature: 34

Protein sequence:

>35_residues
MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK

Sequences:

>Translated_35_residues
MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK
>Mature_34_residues
TLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK

Specific function: Toxic peptide whose overexpression causes rapid cell killing and nucleoid condensation of the host cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the toxic peptide ldr family [H]

Homologues:

Organism=Escherichia coli, GI48994881, Length=35, Percent_Identity=100, Blast_Score=73, Evalue=4e-15,
Organism=Escherichia coli, GI48994882, Length=35, Percent_Identity=94.2857142857143, Blast_Score=69, Evalue=7e-14,
Organism=Escherichia coli, GI48994880, Length=35, Percent_Identity=94.2857142857143, Blast_Score=69, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3972; Mature: 3841

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]