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The map label for this gene is ychA [H]

Identifier: 218689161

GI number: 218689161

Start: 1349720

End: 1350529

Strand: Direct

Name: ychA [H]

Synonym: ECED1_1362

Alternate gene names: 218689161

Gene position: 1349720-1350529 (Clockwise)

Preceding gene: 218689160

Following gene: 218689162

Centisome position: 25.91

GC content: 46.05

Gene sequence:

>810_bases
ATGAGATCGTTAGCTGATTTCGAATTTAATAAAGCGCCATTGTGCGAAGGCATGATCCTGGCTTGCGAAGCAATCCGCCG
CGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGTCTCGTTAGTCTGGCGAAGGAAGAAATTAGCCAGCTTCTGC
CATTAGAAGAGCAGCTAGAAAAATTAATCGCGCTGTTTTACGGCGAATGGGGGTTTAAAGCCTCACGCGGCGTTTATCGT
CTTTCCGATGCATTATGGCTGGACCAGGTGTTAAAGAATCGACAGGGCAGTGCGGTATCATTAGGTGCGGTTTTATTATG
GGTCGCGAATCGTCTCGATTTGCCGCTGCTGCCGGTGATTTTCCCTACGCAGATGATATTGCGCATTGAATGTCCGGATG
GCGAAATTTGGCTGATTAATCCTTTTAACGGTGAATCGTTAAGCGAACATATGCTGGATGTGTGGTTAAAGGGAAATATC
AGCCCGTCGGCGGAACTGTTTTATGAAGACCTTGATGAAGCTGATAACATTGAGGTAATCCGCAAATTGCTGGATACACT
CAAAGCTTCGTTGATGGAAGAAAATCAGATGGAGCTGGCGTTACGCACCAGCGAAGCTTTATTACAATTCAACCCGGAAG
ATCCCTATGAAATTCGCGATCGCGGGTTGATTTATGCGCAACTGGATTGCGAACACGTTGCGTTGAACGATTTAAGTTAT
TTCGTTGAACAGTGTCCGGAAGACCCGATCAGCGAAATGATCCGTGCGCAAATAAATAACATCGCGCATAAACATATTGT
GCTGCATTAA

Upstream 100 bases:

>100_bases
CAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCTGTACATCATCATTAAACTCGCCACCACAAAAG
TACCGTTACTGGGGTAAGTC

Downstream 100 bases:

>100_bases
TTAATCGACATTTTACTCAAGATTAAGGCGATCCTATGAAACAAAAAGTGGTTAGCATTGGCGACATCAACGTAGCAAAT
GACCTGCCGTTCGTACTGTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGEWGFKASRGVYR
LSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQMILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSY
FVEQCPEDPISEMIRAQINNIAHKHIVLH

Sequences:

>Translated_269_residues
MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGEWGFKASRGVYR
LSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQMILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSY
FVEQCPEDPISEMIRAQINNIAHKHIVLH
>Mature_269_residues
MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGEWGFKASRGVYR
LSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQMILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSY
FVEQCPEDPISEMIRAQINNIAHKHIVLH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family [H]

Homologues:

Organism=Escherichia coli, GI1787465, Length=269, Percent_Identity=99.2565055762082, Blast_Score=542, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30874; Mature: 30874

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KLIALFYGEWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHH
FPTQMILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVI
CCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHH
RKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSY
HHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEEECCCHHHHHHHHH
FVEQCPEDPISEMIRAQINNIAHKHIVLH
HHHHCCCCHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KLIALFYGEWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHH
FPTQMILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVI
CCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHH
RKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSY
HHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEEECCCHHHHHHHHH
FVEQCPEDPISEMIRAQINNIAHKHIVLH
HHHHCCCCHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]