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The map label for this gene is ycgB [H]

Identifier: 218689131

GI number: 218689131

Start: 1315652

End: 1317184

Strand: Reverse

Name: ycgB [H]

Synonym: ECED1_1330

Alternate gene names: 218689131

Gene position: 1317184-1315652 (Counterclockwise)

Preceding gene: 218689134

Following gene: 218689129

Centisome position: 25.28

GC content: 49.71

Gene sequence:

>1533_bases
ATGGCGACGATCGATTCTATGAATAAGGACACCACACGTTTGAGCGATGGACCCGACTGGACGTTCGACCTGCTGGATGT
TTATCTGGCAGAGATAGACCGGGTGGCGAAACTCTACCGGCTGGATACCTACCCGCACCAGATTGAAGTGATAACCTCAG
AACAGATGATGGATGCCTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAG
ACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCT
GATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAACTCTTTCTTCAAAAACA
ATTACTTATTCCGTAGCTGGACCGACGCCAGTTCGATTGTCGATTATCTGATTTTTGCCCGTAAATATATTACCGAGTGC
GAAGAGCGTTATGGCGTTGATGAAGTAGAACGGCTTCTGGACTCGTGCCACGCGCTGATGAACTACGGCGTGGACCGGTA
CAAACGCCCGCAAAAAATCTCGCTGCAAGAAGAGAAAGCCCGGCAGAAGAGTCGCGAAGAGTATCTGCAAAGTCAGGTCA
ATATGCTCTGGCGTACCCTGCCGAAGCGCGAGGAAGAGAAAACGGTTGCTGAAGCGCGCCGCTATTCGTCCGAACCACAA
GAAAACCTGCTCTATTTTATGGAGAAAAATGCGCCACTGCTGGAATCATGGCAGCGTGAAATCCTGCGTATTGTGCGTAA
GGTGAGCCAGTATTTTTATCCGCAAAAACAGACTCAGGTGATGAACGAAGGCTGGGCGACCTTCTGGCACTACACCATCC
TTAACCATCTGTATGATGAAGGGAAAGTAACGGAACGTTTTATGCTGGAGTTTTTGCACAGCCACACCAATGTAGTCTTC
CAGCCGCCCTATAACAGCCCGTGGTACAGCGGCATCAACCCGTATGCCCTCGGGTTTGCCATGTTCCAGGATATTAAACG
GATTTGTCAGTCACCAACGGAAGAAGACAAATACTGGTTCCCGGATATCGCCGGTTCCGACTGGCTGGAAACGCTGCATT
TCGCGATGCGTGATTTCAAAGATGAGAGTTTTATCAGCCAGTTCCTGTCACCGAAAGTGATGCGTGATTTCCGCTTCTTC
ACCGTGCTGGATGATGATCGGCATAATTATCTGGAGATTTCCGCTATTCATAATGAAGAAGGTTATCGGGAAATCCGTAA
CCGGTTATCGTCGCAATATAACTTAAGTAATCTGGAGCCGAATATTCAGATCTGGAACGTGGATTTGCGCGGCGACCGTT
CGCTGACGCTGCGTTACATTCCACATAATCGCGCACCGCTGGATCGGGGGCGCAAAGAAGTGCTGAAGCATGTGCATCGC
CTGTGGGGATTTGATGTGATGCTGGAACAGCAAAACGAAGACGGCAGCGTCGAGTTGCTGGAACGTTGCCCGCCGAGAAT
GGGAAATCTGTAA

Upstream 100 bases:

>100_bases
CAAAGAAAAAAATTCTCCGGCGACGCGGTTTTTAACAGGTGTTCTATGCTTGAAATGAGGTGCTCCACACAGAGAGCGCC
GACAACAATGAGGTGCGCGT

Downstream 100 bases:

>100_bases
ATAGTCCTCCTCGTTTGAGGAGGACTCATTTTTGCCGGATGCGGCGTAAATGCCTTATCCGGCCTACAAAGTATCGCAAA
TTCAATACATTGCAAAAAAA

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIE
TERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYSSEPQ
ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVF
QPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFF
TVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR
LWGFDVMLEQQNEDGSVELLERCPPRMGNL

Sequences:

>Translated_510_residues
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIE
TERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYSSEPQ
ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVF
QPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFF
TVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR
LWGFDVMLEQQNEDGSVELLERCPPRMGNL
>Mature_509_residues
ATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIET
ERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECE
ERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYSSEPQE
NLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQ
PPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFT
VLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHRL
WGFDVMLEQQNEDGSVELLERCPPRMGNL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=510, Percent_Identity=99.6078431372549, Blast_Score=1067, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60791; Mature: 60659

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH
SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHH
AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALM
HHHHHCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYSSEPQ
HCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH
ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE
HHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCC
GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCEEEEEEECCCCCEEEEEEECCCH
GYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR
HHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
LWGFDVMLEQQNEDGSVELLERCPPRMGNL
HHCCCEEEECCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
ATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH
SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHH
AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALM
HHHHHCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYSSEPQ
HCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH
ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE
HHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCC
GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCEEEEEEECCCCCEEEEEEECCCH
GYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR
HHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
LWGFDVMLEQQNEDGSVELLERCPPRMGNL
HHCCCEEEECCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]