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The map label for this gene is stfR [H]

Identifier: 218689092

GI number: 218689092

Start: 1283543

End: 1285537

Strand: Reverse

Name: stfR [H]

Synonym: ECED1_1284

Alternate gene names: 218689092

Gene position: 1285537-1283543 (Counterclockwise)

Preceding gene: 218689099

Following gene: 218689091

Centisome position: 24.68

GC content: 48.37

Gene sequence:

>1995_bases
GTGAATATGGCAGTACAGATTTCAGGTGTGCTGAAAGATGGTGCGGGAAAACCAATACAGAACTGCACTATTCAACTGAA
GGCAAAGCGTAACAGCACCACGGTACTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAAGCCGGGCGTTACAGCATGG
ATGTTGAGCATGGCCAGTACAGCGTCATCCTGCTGGTTGAAGGTTTTCCGCCTTCACATGCCGGAACCATTACCGTCTAT
GAAGGTTCCAGACCAGGTACGCTGAATGATTTTCTGGGTGCCATGACGGAAGAGGATGTCATGCCGGAGGCATTGCGTCG
TTTTGAGGTAATGGTGGAGGATGTGGCACGCAACGCTGAAGCCGCCTCTCAGAGCGCAGCGGCAGCAAAGAAATCAGAAA
CAGCAGCGGCATCGTCCAGGAACGCGGCGAAAACATCAGAGACGAATGCAGGTAACAGCGCGAAAGCGGCAGCTTCTTCA
AAAACAGCCGCACAAAACGCAGCAACAGCGGCAGAACGTTCAGAGACAAATGCCCGTGCGTCAGAAGAAGCCTCCGCAGA
CAGTGAAGAGGCTTCCCGCCGTAATGCAGAGTCAGCCGCTGAAAATGCCGGAGTCGCCACCACAAAAGCGCGGGAGGCCG
CAGCAGACGCAACAAAGGCCGGGCAGAAAAAGGATGAGGCTCTGTCGGCAGCGACACGGGCTGAAAAGGCGGCAGACCGC
GCAGAAGTCGCAGCGGAAGTGACGGCAGAGCCTTATGCGAATATAGTGCCGCCGCTGCCTGATGTGTGGATACCGTTTAA
CGATTCACTGGATATGATTGCGGGTTTTTCTCCGGGCTATAAAAAAATAGCTATTGGTGACGATGTGGTTCAGGTCGCCA
GTGATAAACAGGTTAGTTTCACGCGCGCATCAACGGCAACCTATATCAACAAATCTGGTGAACTGAAAACAGCGGAAATT
AATGAGCCGCGATTTGAGCGCGAAGGTCTGCTGATTGAGGGGCAAAGAACTAATTACATGCTGAATTCGGAAACTCCGGC
CAGTTGGGGCAAGTCGGTAAATATGGATATTCCCGAAACCGGGAAGGATAGTTTTGGTTTTACCTATGGAAAGTTCGTCT
GTAACGATTCTCTGATTGGGCAAACCTCAGCTATTAATATGGCATCAATTGCTGCAACAAAGTCAGTTGATGTCTCAGGC
GATAATAAGTACGTGACAACCTCATGCCGTTTTAAAACAGAACGACAGGTAAGGTTACGTATACGGTTTGATAAGTATGA
TGGTAGTGCAACAACTTTTCTTGGCGATGCGTACATTGATACGCAAACGCTTGAAATTAATATGACAGGTGGTGCTGCCG
GCAGAATTACGGCACGAGTCAGGAAGGATAAGACCACAGGCTGGATTTTTGCAGAGGCAACGATTCAGGCAATTGATGGT
GAGTTAAAAATAGGCTCTCAGATACAGTATTCTCCTGAGCGGGGTGGGGCAACAGTATCTGGTGACTATATTTATCTTGC
CACCCCACAAGTAGAGAATGGGCCGTGTGTATCATCATTTATTATTTCAGGAGGCAGCGCAACGACAAGAGCCAGTGATT
TGGTTAGTATCCCCACCAGAAATAATCTTTCTAAGTTACCATTTACTTTTTCACTTGAGATTCATAAAAACTGGGATATT
GCACCAAACGCCGCACCCCGCGTGTGGGATATAGCAGCAGCCAATACCGGGCAATCAGCAATTGCAGCAATCAACAGAGG
TAGTGGTAAGTTATATATGAGTCTGTCAAACCCTTCAGGCTCGTATGTTAATAGCGCAGCGACAGATGTATTTGCAGAGA
AAACCACATTTGGATGTATTGCAAAAGCTGATGGTCACTTTCATGTGGTGACAAATGGTAAAGCGGTTAATGAAGTTTAT
TGTGAATATAATGGCGTGACCGCTGATAAAAATATCCGATTTGGAGGGCAGACGAATACTGGAGAACGACGGTAA

Upstream 100 bases:

>100_bases
CTGGTTGTGGTGATGAAGAAAGCCACTGCAGGCATCACGATTAGCTGAATTTTATAACCCAGATACGGGCGCCAGAAATG
GCGCCTTTTTTATTTGTGGA

Downstream 100 bases:

>100_bases
TGCTGCCAACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCC
TGCTCCGCTACTGAAGGCGT

Product: putative side tail fiber protein from lambdoid prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MNMAVQISGVLKDGAGKPIQNCTIQLKAKRNSTTVLVNTVASENPDEAGRYSMDVEHGQYSVILLVEGFPPSHAGTITVY
EGSRPGTLNDFLGAMTEEDVMPEALRRFEVMVEDVARNAEAASQSAAAAKKSETAAASSRNAAKTSETNAGNSAKAAASS
KTAAQNAATAAERSETNARASEEASADSEEASRRNAESAAENAGVATTKAREAAADATKAGQKKDEALSAATRAEKAADR
AEVAAEVTAEPYANIVPPLPDVWIPFNDSLDMIAGFSPGYKKIAIGDDVVQVASDKQVSFTRASTATYINKSGELKTAEI
NEPRFEREGLLIEGQRTNYMLNSETPASWGKSVNMDIPETGKDSFGFTYGKFVCNDSLIGQTSAINMASIAATKSVDVSG
DNKYVTTSCRFKTERQVRLRIRFDKYDGSATTFLGDAYIDTQTLEINMTGGAAGRITARVRKDKTTGWIFAEATIQAIDG
ELKIGSQIQYSPERGGATVSGDYIYLATPQVENGPCVSSFIISGGSATTRASDLVSIPTRNNLSKLPFTFSLEIHKNWDI
APNAAPRVWDIAAANTGQSAIAAINRGSGKLYMSLSNPSGSYVNSAATDVFAEKTTFGCIAKADGHFHVVTNGKAVNEVY
CEYNGVTADKNIRFGGQTNTGERR

Sequences:

>Translated_664_residues
MNMAVQISGVLKDGAGKPIQNCTIQLKAKRNSTTVLVNTVASENPDEAGRYSMDVEHGQYSVILLVEGFPPSHAGTITVY
EGSRPGTLNDFLGAMTEEDVMPEALRRFEVMVEDVARNAEAASQSAAAAKKSETAAASSRNAAKTSETNAGNSAKAAASS
KTAAQNAATAAERSETNARASEEASADSEEASRRNAESAAENAGVATTKAREAAADATKAGQKKDEALSAATRAEKAADR
AEVAAEVTAEPYANIVPPLPDVWIPFNDSLDMIAGFSPGYKKIAIGDDVVQVASDKQVSFTRASTATYINKSGELKTAEI
NEPRFEREGLLIEGQRTNYMLNSETPASWGKSVNMDIPETGKDSFGFTYGKFVCNDSLIGQTSAINMASIAATKSVDVSG
DNKYVTTSCRFKTERQVRLRIRFDKYDGSATTFLGDAYIDTQTLEINMTGGAAGRITARVRKDKTTGWIFAEATIQAIDG
ELKIGSQIQYSPERGGATVSGDYIYLATPQVENGPCVSSFIISGGSATTRASDLVSIPTRNNLSKLPFTFSLEIHKNWDI
APNAAPRVWDIAAANTGQSAIAAINRGSGKLYMSLSNPSGSYVNSAATDVFAEKTTFGCIAKADGHFHVVTNGKAVNEVY
CEYNGVTADKNIRFGGQTNTGERR
>Mature_664_residues
MNMAVQISGVLKDGAGKPIQNCTIQLKAKRNSTTVLVNTVASENPDEAGRYSMDVEHGQYSVILLVEGFPPSHAGTITVY
EGSRPGTLNDFLGAMTEEDVMPEALRRFEVMVEDVARNAEAASQSAAAAKKSETAAASSRNAAKTSETNAGNSAKAAASS
KTAAQNAATAAERSETNARASEEASADSEEASRRNAESAAENAGVATTKAREAAADATKAGQKKDEALSAATRAEKAADR
AEVAAEVTAEPYANIVPPLPDVWIPFNDSLDMIAGFSPGYKKIAIGDDVVQVASDKQVSFTRASTATYINKSGELKTAEI
NEPRFEREGLLIEGQRTNYMLNSETPASWGKSVNMDIPETGKDSFGFTYGKFVCNDSLIGQTSAINMASIAATKSVDVSG
DNKYVTTSCRFKTERQVRLRIRFDKYDGSATTFLGDAYIDTQTLEINMTGGAAGRITARVRKDKTTGWIFAEATIQAIDG
ELKIGSQIQYSPERGGATVSGDYIYLATPQVENGPCVSSFIISGGSATTRASDLVSIPTRNNLSKLPFTFSLEIHKNWDI
APNAAPRVWDIAAANTGQSAIAAINRGSGKLYMSLSNPSGSYVNSAATDVFAEKTTFGCIAKADGHFHVVTNGKAVNEVY
CEYNGVTADKNIRFGGQTNTGERR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Escherichia coli, GI87081892, Length=122, Percent_Identity=86.8852459016393, Blast_Score=233, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 70488; Mature: 70488

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMAVQISGVLKDGAGKPIQNCTIQLKAKRNSTTVLVNTVASENPDEAGRYSMDVEHGQY
CCEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCE
SVILLVEGFPPSHAGTITVYEGSRPGTLNDFLGAMTEEDVMPEALRRFEVMVEDVARNAE
EEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AASQSAAAAKKSETAAASSRNAAKTSETNAGNSAKAAASSKTAAQNAATAAERSETNARA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCC
SEEASADSEEASRRNAESAAENAGVATTKAREAAADATKAGQKKDEALSAATRAEKAADR
CHHCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AEVAAEVTAEPYANIVPPLPDVWIPFNDSLDMIAGFSPGYKKIAIGDDVVQVASDKQVSF
HHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHEECCCCCCEEEEECCHHHHHCCCCEEEE
TRASTATYINKSGELKTAEINEPRFEREGLLIEGQRTNYMLNSETPASWGKSVNMDIPET
EECCEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCEEECCCCCHHCCCEECCCCCCC
GKDSFGFTYGKFVCNDSLIGQTSAINMASIAATKSVDVSGDNKYVTTSCRFKTERQVRLR
CCCCCCEEEEEEEECCCCCCCCCCCCEEHEEEECEEEECCCCCEEEEEEEECCCEEEEEE
IRFDKYDGSATTFLGDAYIDTQTLEINMTGGAAGRITARVRKDKTTGWIFAEATIQAIDG
EEEEECCCCEEEEEECEEEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEEECC
ELKIGSQIQYSPERGGATVSGDYIYLATPQVENGPCVSSFIISGGSATTRASDLVSIPTR
CEEECCEEEECCCCCCEEECCCEEEEECCCCCCCCCHHHEEEECCCCCCCCCCEEECCCC
NNLSKLPFTFSLEIHKNWDIAPNAAPRVWDIAAANTGQSAIAAINRGSGKLYMSLSNPSG
CCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCC
SYVNSAATDVFAEKTTFGCIAKADGHFHVVTNGKAVNEVYCEYNGVTADKNIRFGGQTNT
CCCCHHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEEEEEEECCEECCCCEEECCCCCC
GERR
CCCC
>Mature Secondary Structure
MNMAVQISGVLKDGAGKPIQNCTIQLKAKRNSTTVLVNTVASENPDEAGRYSMDVEHGQY
CCEEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCE
SVILLVEGFPPSHAGTITVYEGSRPGTLNDFLGAMTEEDVMPEALRRFEVMVEDVARNAE
EEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AASQSAAAAKKSETAAASSRNAAKTSETNAGNSAKAAASSKTAAQNAATAAERSETNARA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCC
SEEASADSEEASRRNAESAAENAGVATTKAREAAADATKAGQKKDEALSAATRAEKAADR
CHHCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AEVAAEVTAEPYANIVPPLPDVWIPFNDSLDMIAGFSPGYKKIAIGDDVVQVASDKQVSF
HHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHEECCCCCCEEEEECCHHHHHCCCCEEEE
TRASTATYINKSGELKTAEINEPRFEREGLLIEGQRTNYMLNSETPASWGKSVNMDIPET
EECCEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCEEECCCCCHHCCCEECCCCCCC
GKDSFGFTYGKFVCNDSLIGQTSAINMASIAATKSVDVSGDNKYVTTSCRFKTERQVRLR
CCCCCCEEEEEEEECCCCCCCCCCCCEEHEEEECEEEECCCCCEEEEEEEECCCEEEEEE
IRFDKYDGSATTFLGDAYIDTQTLEINMTGGAAGRITARVRKDKTTGWIFAEATIQAIDG
EEEEECCCCEEEEEECEEEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEEEECC
ELKIGSQIQYSPERGGATVSGDYIYLATPQVENGPCVSSFIISGGSATTRASDLVSIPTR
CEEECCEEEECCCCCCEEECCCEEEEECCCCCCCCCHHHEEEECCCCCCCCCCEEECCCC
NNLSKLPFTFSLEIHKNWDIAPNAAPRVWDIAAANTGQSAIAAINRGSGKLYMSLSNPSG
CCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCC
SYVNSAATDVFAEKTTFGCIAKADGHFHVVTNGKAVNEVYCEYNGVTADKNIRFGGQTNT
CCCCHHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEEEEEEECCEECCCCEEECCCCCC
GERR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]