Definition | Escherichia coli ED1a chromosome, complete genome. |
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Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yceA [C]
Identifier: 218689009
GI number: 218689009
Start: 1202790
End: 1203842
Strand: Direct
Name: yceA [C]
Synonym: ECED1_1200
Alternate gene names: 218689009
Gene position: 1202790-1203842 (Clockwise)
Preceding gene: 218689005
Following gene: 218689019
Centisome position: 23.09
GC content: 48.91
Gene sequence:
>1053_bases ATGCCAGTGTTACACAACCGCATTTCCAACGACGCGTTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCAT TTCGTTTTATAAGTATTTCCACATTGCCGATCCTAAGGTGACCCGTGACGCTTTATATCAACTGTTTACCGCGCTGAATG TTTTTGGGCGAGTGTATCTGGCGCATGAGGGCATTAACGCGCAAATCAGCGTACCTGCGAGCAATGTTGAAACATTTCGC GCGCAGCTCTATGCCTTCGACCCGGCTTTAGAGGGTTTACGCCTGAATATCGCGTTGGATGATGACGGGAAATCCTTCTG GGTACTGCGTATGAAGGTACGCGATCGCATTGTTGCCGACGGTATTGACGATCCTCTCTTTGATGCCAGCAATGTTGGTG AGTATCTGCAAGCGGCGGAAGTGAACGCCATGCTTGACGATCCCGATGCATTGTTTATCGACATGCGTAACCACTATGAG TATGAAGTGGGGCACTTTGAAAACGCGCTGGAAATACCGGCAGATACCTTCCGTGAGCAGCTGCCAAAAGCAGTTGAGAT GATGCAGGCACATAAAGATAAAAAAATCGTCATGTACTGCACCGGCGGCATTCGTTGTGAAAAGGCCAGTGCCTGGATGA AACATAACGGATTCAACAAAGTCTGGCATATCGAGGGCGGAATTATTGAATACGCCCGTAAGGCGCGCGAGCAGGGCTTG CCGGTGCGTTTTATTGGCAAAAATTTTGTTTTTGACGAGCGGATGGGCGAACGTATATCTGATGAGATTATCGCGCACTG CCACCAGTGCGGTGCGCCGTGCGACAGCCATACCAACTGTAAAAATGATGGCTGCCATCTGTTGTTTATTCAGTGTCCAG TATGTGCGGAAAAATACAAAGGTTGTTGTAGTGAGATTTGCTGCGAAGAAAGCGCGTTACCGCCAGAGGAACAGCGACGC CGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGGGCATTCCTGA ACCAACAGAATAA
Upstream 100 bases:
>100_bases AATGCTAAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCA TCTCGCAGGAACCGTACACC
Downstream 100 bases:
>100_bases ATATCATTGCCGGATGCGTGCCATCCGGCAACATTTCACTCTTACTTCTGCTGTACGCCTTCCACTGAAATAATCAGATC CACTTCCTGAGACGCTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKVTRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFR AQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPLFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYE YEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGL PVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRR RRAGRENGNKIFNKSRGRLNTTLGIPEPTE
Sequences:
>Translated_350_residues MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKVTRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFR AQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPLFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYE YEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGL PVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRR RRAGRENGNKIFNKSRGRLNTTLGIPEPTE >Mature_349_residues PVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKVTRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRA QLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPLFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEY EVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLP VRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRR RAGRENGNKIFNKSRGRLNTTLGIPEPTE
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=298, Percent_Identity=28.5234899328859, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1787294, Length=350, Percent_Identity=98.8571428571429, Blast_Score=724, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 39754; Mature: 39623
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKVTRDALYQLFTALNVFGRVYL CCCCHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEE AHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVAD EECCCCEEEECCCHHHHHHHHHHEEECCCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHC GIDDPLFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQ CCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHH LPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGL HHHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCC PVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYK CEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHH GCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLGIPEPTE HHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure PVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKVTRDALYQLFTALNVFGRVYL CCCHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEE AHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVAD EECCCCEEEECCCHHHHHHHHHHEEECCCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHC GIDDPLFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQ CCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHH LPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGL HHHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCC PVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYK CEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHH GCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLGIPEPTE HHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA