| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is lpxL [H]
Identifier: 218689008
GI number: 218689008
Start: 1201645
End: 1202565
Strand: Reverse
Name: lpxL [H]
Synonym: ECED1_1199
Alternate gene names: 218689008
Gene position: 1202565-1201645 (Counterclockwise)
Preceding gene: 218689010
Following gene: 218689007
Centisome position: 23.08
GC content: 53.42
Gene sequence:
>921_bases ATGACGAATCTACCCAAGTTCTCCACCGCACTGCTTCATCCGCGTTATTGGTTAACCTGGTTGGGTATTGGCGTACTTTG GTTGGTCGTGCAATTGCCCTACCCGGTTATCTACCGCCTCGGTTGTGGATTAGGAAAACTGGCGTTACGTTTTATGAAAC GACGCGCAAAAATTGTGCATCGCAACCTGGAACTGTGCTTCCCGGAAATGAGCGAACAAGAACGCCGTAAAATGGTGGTG AAGAATTTCGAATCCGTTGGCATGGGCCTGATGGAAACCGGCATGGCGTGGTTCTGGCCGGACCGCCGAATCGCCCGCTG GACGGAAGTGATCGGCATGGAACACATTCGTGACGTGCAGGCGCAAAAACGCGGCATCCTGTTAGTTGGCATCCATTTTC TGACACTGGAGCTGGGTGCGCGGCAGTTTGGTATGCAGGAACCGGGGATTGGCGTTTACCGCCCGAACGATAATCCACTG ATTGACTGGCTACAAACCTGGGGCCGTTTGCGCTCAAATAAATCGATGCTCGACCGCAAAGATTTAAAAGGCATGATTAA AGCCCTGAAAAAAGGCGAAGTGGTCTGGTACGCACCGGATCATGATTACGGCCCGCGCTCAAGCGTTTTCGTCCCGTTGT TTGCCGTTGAGCAGGCTGCGACCACGACCGGAACCTGGATGCTGGCACGGATGTCCGGCGCATGTCTGGTGCCCTTCGTT CCACGCCGTAAGCCAGATGGCAAAGGGTATCAGTTGATTATACTGCCGCCAGAGTGTTCTCCGCCGCTGGATGATGCCGA AACTACCGCCGCGTGGATGAACAAAGTGGTCGAAAAATGCATCATGATGGCACCAGAGCAGTATATGTGGTTACACCGTC GCTTTAAAACACGCCCGGAAGGCGTTCCTTCACGCTATTAA
Upstream 100 bases:
>100_bases GCGGCAATTTCGCCCAGTCTTCAGTCACAAATTTTGGTTGCGGACGAAAAAATGCGACAATACATACAATTGCCCGTATA GGTTGAAAAACAGGATTGAT
Downstream 100 bases:
>100_bases ATCTTCCATGCTGGATGCTTCAGAATGGCATCCGGCATTACCACAGAAAATCCCCCTGATTTAGCGATAAAAGCTCTCTG GATTGCGCCCCCTGGAAGTC
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: Heat shock protein B [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVV KNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFV PRRKPDGKGYQLIILPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPEGVPSRY
Sequences:
>Translated_306_residues MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVV KNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFV PRRKPDGKGYQLIILPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPEGVPSRY >Mature_305_residues TNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVK NFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLI DWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFVP RRKPDGKGYQLIILPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPEGVPSRY
Specific function: Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA. Has 10 fold selectivity for lauroyl- ACP over myristoyl-ACP [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1787292, Length=306, Percent_Identity=99.6732026143791, Blast_Score=630, Evalue=0.0, Organism=Escherichia coli, GI87082094, Length=301, Percent_Identity=55.1495016611296, Blast_Score=363, Evalue=1e-102, Organism=Escherichia coli, GI1788161, Length=310, Percent_Identity=30.9677419354839, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 35389; Mature: 35258
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVH CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHH RNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQ HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHH AQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRK HHHCCEEEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHH DLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFV HHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEHHHHHHHHCCHHHHHEEHHCCCEEECCC PRRKPDGKGYQLIILPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPE CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GVPSRY CCCCCC >Mature Secondary Structure TNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVH CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHH RNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQ HHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHH AQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRK HHHCCEEEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHH DLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFV HHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEHHHHHHHHCCHHHHHEEHHCCCEEECCC PRRKPDGKGYQLIILPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPE CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC GVPSRY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]