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The map label for this gene is csgC [H]

Identifier: 218688996

GI number: 218688996

Start: 1190945

End: 1191277

Strand: Direct

Name: csgC [H]

Synonym: ECED1_1187

Alternate gene names: 218688996

Gene position: 1190945-1191277 (Clockwise)

Preceding gene: 218688995

Following gene: 218688997

Centisome position: 22.86

GC content: 42.34

Gene sequence:

>333_bases
ATGAATGCGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATATGTACACCAT
TATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAGTACAAATATTGTCCCTGCGCGAAGGCAGTTCAGGGCAAA
GTCAGACGAAGCAAGAAAAGACCCTTTCATTGCCTGCTAATCAACTCATTGCTTTGACGAAGTTGAGTTTAAATATTTCC
CCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGTCCTCTTC
AGAAAAGTCTTAA

Upstream 100 bases:

>100_bases
CAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATCAGTATGAAAGAAACAGGGCGCAAGCCCTG
TTTTTTTTCGGGAGAAGAAT

Downstream 100 bases:

>100_bases
TTTGTTGAAATATCGAGCATAAGATGAACCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACA
CAACCCTCAAGGATGACTAA

Product: putative autoagglutination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQLIALTKLSLNIS
PDDRVKIVVTVSDGQSLHLSQQWPSSSEKS

Sequences:

>Translated_110_residues
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQLIALTKLSLNIS
PDDRVKIVVTVSDGQSLHLSQQWPSSSEKS
>Mature_110_residues
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQLIALTKLSLNIS
PDDRVKIVVTVSDGQSLHLSQQWPSSSEKS

Specific function: Plays a role in the extracellular assembly of CsgA into thin aggregative fimbriae (Tafi) fibers. Assembly may also require CsgE. Tafi are thought to be assembled via an extracellular nucleation-precipitation (ENP) pathway, and possibly also via an intrace

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsgC/AgfC family [H]

Homologues:

Organism=Escherichia coli, GI1787280, Length=110, Percent_Identity=96.3636363636364, Blast_Score=192, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014491 [H]

Pfam domain/function: PF10610 Tafi-CsgC [H]

EC number: NA

Molecular weight: Translated: 11975; Mature: 11975

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEK
CCCEEEEEECCCCEEEECCCCCCEEEEECCCHHCHHHHHEEEEEEECCCCCCCCCCCCHH
TLSLPANQLIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPSSSEKS
EECCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MNALLLLAALSSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEK
CCCEEEEEECCCCEEEECCCCCCEEEEECCCHHCHHHHHEEEEEEECCCCCCCCCCCCHH
TLSLPANQLIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPSSSEKS
EECCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA