| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218688954
Identifier: 218688954
GI number: 218688954
Start: 1144732
End: 1146000
Strand: Direct
Name: 218688954
Synonym: ECED1_1145
Alternate gene names: NA
Gene position: 1144732-1146000 (Clockwise)
Preceding gene: 218688953
Following gene: 218688955
Centisome position: 21.97
GC content: 50.67
Gene sequence:
>1269_bases ATGACAAAAAAACCGTGGCGCGCAGGAAAGGATTTATCTGCGGTTGTGGAAAATATGGAGATAGGGACAGGACAACGTGG CGATGGTCGTCATGCTTTTGTAACCCGTGAAGAACTGGTCGGTCTGAAGCTGGCCCGTCGCCGGACTTCAGGTGGTGCCG CATATGCCCTTAATCCGGGGATTGAGATGGACAGCTCTGTAATGGTCGTTGATTTCCCATCGAAACCTCAGAATTTTAAG GCGACAGGGGGATTTGGCTCGGTACTGCTTGAATGGGATATGCCGAATTATCGCGGTCATTCACTGACTGAAATCTGGCG GGGTACGGAGGATGACCTTTCGGATGCGGTGCTGGTTGCCACGACGCCGGGGCAGGTTTACGGTGATCCGGTTGATCCGG GCTGGTCGGGATTCTACTGGATACGCTTTGTTAATGCAGCGGGAGTGAAAGGGCCATGGAACGCGGTAAAAGGCACTCCC GCACAAACCCAGATAAGCGTTCAGGCCATTATTGACCAGATCAAGGAGGAGGCTGCAAAGTCACCGGTGGTGGAAGAGCT GCGTAAGGAAATAAAGAATGCTCAGGGGCAGGCAGTAAAGGACGCGGCAATCGAGACGACGGAAGTTGTGGGTAATCTCA GGGAAGAAACACTGAAAACTATCGGTGGTATTGATACCCGTGTTACGGGGATGAATAAGTCAACCAGTGAAGAGCTTAAT AAGGTAAATGAGCGCATCACTAAGGTGGATAAAGAAGGCGGTGAAGCTTTCCTGGCCATGTGGTCAAAAAAGACCGGTGT TGAGGGAATTACTGCGGGGATCGGAATTGTTGCAGGAAAAGATGGTGAAGGGAAGCCGGTAAGCCAGGTTGCAATTTCGG CATCGCAGTTGTTTGTCTTTGACCCGAACAACCCGGATAACACAGCCTATCCGTTTGCGGTATCAGGTGGCAAGGTTGTG ATCCCGAAAGCGATGATTTATGACGCGGTGATTGAAACACTGGTGTCGCGGAAGGTTGTGGCGGATGAGGTAAAAGCAGG GGTAAGTATCACGTCGCCTGTTATCCGGAGTGCTGTTATTCAGAACGGGAACTTTCAGGTTGATTCTCAGGGTAACCTGA ATATTGGTGGCCTTTTTAGTGTTACGTCGCAGGGGCAACTGACAATTCGTTACTCTAATCAGAATGTGGGGCTGGTGATC CGCAATGATAAAATTGAAGTTTATGACCAGAACGGACGCCTGGCTGTTCGCATAGGCAGGTTAAGCTGA
Upstream 100 bases:
>100_bases GATTACCTGCTGCAACCGGGCAAAACTGGCAGATACTGGTTTCCGGTTTTGGTCAGGTTGAACGTATTACACTCAGTACA TCGATGTCGGAGCTGCCGGT
Downstream 100 bases:
>100_bases GCCGGAGGCTGACATTGGCAGAATATGGTTTTGCAATATACAACAGAAACAATGTTAATGTTACGGGCGTGCTTACTCCC ATATTTTTCCTGGACAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRTSGGAAYALNPGIEMDSSVMVVDFPSKPQNFK ATGGFGSVLLEWDMPNYRGHSLTEIWRGTEDDLSDAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWNAVKGTP AQTQISVQAIIDQIKEEAAKSPVVEELRKEIKNAQGQAVKDAAIETTEVVGNLREETLKTIGGIDTRVTGMNKSTSEELN KVNERITKVDKEGGEAFLAMWSKKTGVEGITAGIGIVAGKDGEGKPVSQVAISASQLFVFDPNNPDNTAYPFAVSGGKVV IPKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVI RNDKIEVYDQNGRLAVRIGRLS
Sequences:
>Translated_422_residues MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRTSGGAAYALNPGIEMDSSVMVVDFPSKPQNFK ATGGFGSVLLEWDMPNYRGHSLTEIWRGTEDDLSDAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWNAVKGTP AQTQISVQAIIDQIKEEAAKSPVVEELRKEIKNAQGQAVKDAAIETTEVVGNLREETLKTIGGIDTRVTGMNKSTSEELN KVNERITKVDKEGGEAFLAMWSKKTGVEGITAGIGIVAGKDGEGKPVSQVAISASQLFVFDPNNPDNTAYPFAVSGGKVV IPKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVI RNDKIEVYDQNGRLAVRIGRLS >Mature_421_residues TKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRTSGGAAYALNPGIEMDSSVMVVDFPSKPQNFKA TGGFGSVLLEWDMPNYRGHSLTEIWRGTEDDLSDAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWNAVKGTPA QTQISVQAIIDQIKEEAAKSPVVEELRKEIKNAQGQAVKDAAIETTEVVGNLREETLKTIGGIDTRVTGMNKSTSEELNK VNERITKVDKEGGEAFLAMWSKKTGVEGITAGIGIVAGKDGEGKPVSQVAISASQLFVFDPNNPDNTAYPFAVSGGKVVI PKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIR NDKIEVYDQNGRLAVRIGRLS
Specific function: Unknown
COG id: COG4733
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45367; Mature: 45236
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRTSGGAAYALNPG CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCC IEMDSSVMVVDFPSKPQNFKATGGFGSVLLEWDMPNYRGHSLTEIWRGTEDDLSDAVLVA CCCCCCEEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEE TTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWNAVKGTPAQTQISVQAIIDQIKEEAAK ECCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHC SPVVEELRKEIKNAQGQAVKDAAIETTEVVGNLREETLKTIGGIDTRVTGMNKSTSEELN CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH KVNERITKVDKEGGEAFLAMWSKKTGVEGITAGIGIVAGKDGEGKPVSQVAISASQLFVF HHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECEEEEECCCCCCCCHHHHEEEEEEEEEE DPNNPDNTAYPFAVSGGKVVIPKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVI CCCCCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDQNGRLAVRIGR CCCCEEECCCCCEEECEEEEECCCCEEEEEECCCCEEEEEECCEEEEEECCCEEEEEEEC LS CC >Mature Secondary Structure TKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRTSGGAAYALNPG CCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCC IEMDSSVMVVDFPSKPQNFKATGGFGSVLLEWDMPNYRGHSLTEIWRGTEDDLSDAVLVA CCCCCCEEEEECCCCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCEEEEE TTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWNAVKGTPAQTQISVQAIIDQIKEEAAK ECCCCEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHC SPVVEELRKEIKNAQGQAVKDAAIETTEVVGNLREETLKTIGGIDTRVTGMNKSTSEELN CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH KVNERITKVDKEGGEAFLAMWSKKTGVEGITAGIGIVAGKDGEGKPVSQVAISASQLFVF HHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECEEEEECCCCCCCCHHHHEEEEEEEEEE DPNNPDNTAYPFAVSGGKVVIPKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVI CCCCCCCCCCEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDQNGRLAVRIGR CCCCEEECCCCCEEECEEEEECCCCEEEEEECCCCEEEEEECCEEEEEECCCEEEEEEEC LS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA