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The map label for this gene is yadA [H]

Identifier: 218688950

GI number: 218688950

Start: 1141109

End: 1142188

Strand: Direct

Name: yadA [H]

Synonym: ECED1_1141

Alternate gene names: 218688950

Gene position: 1141109-1142188 (Clockwise)

Preceding gene: 218688948

Following gene: 218688951

Centisome position: 21.9

GC content: 44.91

Gene sequence:

>1080_bases
ATGAGCAAGAAATTTACAAAGACTATTCTTTCATCTGCTGTTGCCGGACTGATGCTGGTGAGTTCTGGGGCCATGGCTTT
AGATATCCCAGTTAAAGGCAGCGATTACATCGTAAAATTTTACAAGGATGGGGAAGGTGCCAAGATAGTAGACGCACAAG
GAAAAGAGGTTTTAGGTGCTATTAATACAACAACAGGAAGCATCATGGCCTTTAATGAAAAGGAGTTTACTAATTTTTTA
GCAACACACGGAAAAACACTTGATAAAAGTAAAATGCAGGATTATTTAAATTCTATTGCGTATCCTGTCTACTTACCTGA
GTTAAAGCTGGAAAATATTAAAAAGTTAAAGGGTACAGACGTTGAAAAAATAAAAAAAGTTAAGGATGATGTATCCAAGA
TTATTACCTCCAAAACCGCGGCCGATTATAACCAGGCTGTAAAAAATGGTATGAGTTCTGAAGCTGCACTGACTGTAGCT
AAAGATGGTGGTGCAGTCTTAAAAGAATTCAACCGAATTGATTCGGATATCGACCAACTGAATAAAGAGACAACTTTTGC
GCTTGATGCCGATGGCAATATCACGCTGGATGAAAATCAGGGAAGCGGTGAGCGTTATTCTGTAAAACAAACAGTCGCAG
ATATTAAGGCTGACACTACTGTCTACCAGAATAAAGATGGCAGCTATACACTTGACCAGAGCGCACCGGGCAACGTTCGT
GTGAATGATGCTGTTGTCAGCCTCGACAACAGAACCCGCAGTAACACCCAGGCTATCCAGAATCACTCCCGCCAGCTGCA
GGAGCATAACGCACGCCTGAACAGCCAGCAGCGCCAGATTCGTGAAAACCACGAAGAAATGAAACGTGCGGCAGCACAGA
GTGCGGCGCTGTCCGGTCTGTTCCAGCCGTACAGTGTGGGTAAATTCAACGCCACGGCAGCCCTGGGTGGTTACAGTGAC
AAACAGGCTGTGGCTGTTGGTGTGGGTTACCGCTTCAACGAGCAGACCGCAGCCAAAGCAGGTATTGCGGCCAGCGACGG
TGATGTTTCCTACAACGTAGGTGTGAACTTCGAGTTTTAA

Upstream 100 bases:

>100_bases
AGGAGTAAGCTCATGAGAGCGGCGAGACATCAGATTTTCTTTATATATCCGATGTTGAACTGTTTTATTTGTATACAGAT
AATTTTATAGGGTATACCAC

Downstream 100 bases:

>100_bases
TTGCTGAAGGTGACATGAAGTATGACGGCAGGCGCAGGACTCTGGTCTGCCGTTTTTCATGGGGCATAAAAAACAGGAAG
GTGCTGCGATGAAGGTGATT

Product: putative immunoglobulin-binding protein from phage origin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSKKFTKTILSSAVAGLMLVSSGAMALDIPVKGSDYIVKFYKDGEGAKIVDAQGKEVLGAINTTTGSIMAFNEKEFTNFL
ATHGKTLDKSKMQDYLNSIAYPVYLPELKLENIKKLKGTDVEKIKKVKDDVSKIITSKTAADYNQAVKNGMSSEAALTVA
KDGGAVLKEFNRIDSDIDQLNKETTFALDADGNITLDENQGSGERYSVKQTVADIKADTTVYQNKDGSYTLDQSAPGNVR
VNDAVVSLDNRTRSNTQAIQNHSRQLQEHNARLNSQQRQIRENHEEMKRAAAQSAALSGLFQPYSVGKFNATAALGGYSD
KQAVAVGVGYRFNEQTAAKAGIAASDGDVSYNVGVNFEF

Sequences:

>Translated_359_residues
MSKKFTKTILSSAVAGLMLVSSGAMALDIPVKGSDYIVKFYKDGEGAKIVDAQGKEVLGAINTTTGSIMAFNEKEFTNFL
ATHGKTLDKSKMQDYLNSIAYPVYLPELKLENIKKLKGTDVEKIKKVKDDVSKIITSKTAADYNQAVKNGMSSEAALTVA
KDGGAVLKEFNRIDSDIDQLNKETTFALDADGNITLDENQGSGERYSVKQTVADIKADTTVYQNKDGSYTLDQSAPGNVR
VNDAVVSLDNRTRSNTQAIQNHSRQLQEHNARLNSQQRQIRENHEEMKRAAAQSAALSGLFQPYSVGKFNATAALGGYSD
KQAVAVGVGYRFNEQTAAKAGIAASDGDVSYNVGVNFEF
>Mature_358_residues
SKKFTKTILSSAVAGLMLVSSGAMALDIPVKGSDYIVKFYKDGEGAKIVDAQGKEVLGAINTTTGSIMAFNEKEFTNFLA
THGKTLDKSKMQDYLNSIAYPVYLPELKLENIKKLKGTDVEKIKKVKDDVSKIITSKTAADYNQAVKNGMSSEAALTVAK
DGGAVLKEFNRIDSDIDQLNKETTFALDADGNITLDENQGSGERYSVKQTVADIKADTTVYQNKDGSYTLDQSAPGNVRV
NDAVVSLDNRTRSNTQAIQNHSRQLQEHNARLNSQQRQIRENHEEMKRAAAQSAALSGLFQPYSVGKFNATAALGGYSDK
QAVAVGVGYRFNEQTAAKAGIAASDGDVSYNVGVNFEF

Specific function: Collagen-binding outer membrane protein forming a fibrillar matrix on the bacterial cell surface. Promotes initial attachment and invasion of eukaryotic cells. Also protects the bacteria by being responsible for agglutination, serum resistance, complement

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autotransporter-2 (TC 1.B.40) / oligomeric coiled-coil adhesin (Oca) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008640
- InterPro:   IPR008635
- InterPro:   IPR008126
- InterPro:   IPR005594 [H]

Pfam domain/function: PF05658 Hep_Hag; PF05662 HIM; PF03895 YadA [H]

EC number: NA

Molecular weight: Translated: 38872; Mature: 38741

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKFTKTILSSAVAGLMLVSSGAMALDIPVKGSDYIVKFYKDGEGAKIVDAQGKEVLGA
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCEEEEE
INTTTGSIMAFNEKEFTNFLATHGKTLDKSKMQDYLNSIAYPVYLPELKLENIKKLKGTD
EECCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCC
VEKIKKVKDDVSKIITSKTAADYNQAVKNGMSSEAALTVAKDGGAVLKEFNRIDSDIDQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
NKETTFALDADGNITLDENQGSGERYSVKQTVADIKADTTVYQNKDGSYTLDQSAPGNVR
CCCCEEEEECCCCEEEECCCCCCCEEEHHHHHHHHHCCCEEEECCCCCEEECCCCCCCEE
VNDAVVSLDNRTRSNTQAIQNHSRQLQEHNARLNSQQRQIRENHEEMKRAAAQSAALSGL
ECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
FQPYSVGKFNATAALGGYSDKQAVAVGVGYRFNEQTAAKAGIAASDGDVSYNVGVNFEF
CCCCCCCCCCCEEEECCCCCCCEEEEEECEEECCHHHHHCCCEECCCCEEEEEEEEECC
>Mature Secondary Structure 
SKKFTKTILSSAVAGLMLVSSGAMALDIPVKGSDYIVKFYKDGEGAKIVDAQGKEVLGA
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCEEEEE
INTTTGSIMAFNEKEFTNFLATHGKTLDKSKMQDYLNSIAYPVYLPELKLENIKKLKGTD
EECCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCC
VEKIKKVKDDVSKIITSKTAADYNQAVKNGMSSEAALTVAKDGGAVLKEFNRIDSDIDQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
NKETTFALDADGNITLDENQGSGERYSVKQTVADIKADTTVYQNKDGSYTLDQSAPGNVR
CCCCEEEEECCCCEEEECCCCCCCEEEHHHHHHHHHCCCEEEECCCCCEEECCCCCCCEE
VNDAVVSLDNRTRSNTQAIQNHSRQLQEHNARLNSQQRQIRENHEEMKRAAAQSAALSGL
ECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
FQPYSVGKFNATAALGGYSDKQAVAVGVGYRFNEQTAAKAGIAASDGDVSYNVGVNFEF
CCCCCCCCCCCEEEECCCCCCCEEEEEECEEECCHHHHHCCCEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14527656; 2592347 [H]