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The map label for this gene is stfR [H]

Identifier: 218688866

GI number: 218688866

Start: 1072130

End: 1073683

Strand: Direct

Name: stfR [H]

Synonym: ECED1_1054

Alternate gene names: 218688866

Gene position: 1072130-1073683 (Clockwise)

Preceding gene: 218688865

Following gene: 218688867

Centisome position: 20.58

GC content: 61.97

Gene sequence:

>1554_bases
ATGACAGTCAGAATATCGGGCGTGCTGAAGGACGGCACCGGGAAGCCGGTGCCGGGATGCACCATAGAGCTGAAAGCGCG
ACGCACCACAGAGACAGTGATAGTCACCACGGTGGCGCAGGGGCAGCCGGGGGAAACCGGCAGTTACAGTTTTGATGTGG
AGCCGGGGTGGTACCGGGTGACGCTGAACACGGAAGGGTACGCCCCGTCGTATGTGGGTGACATTCTGGTGAAGGCGGAT
TCTGAGCCGGGAACGCTGAATAAATTTCTGATGGAACAGGATGAGGCGCAGTATTACCCGAAAGCGCTTGCAGAGCTGGA
AGCGGTGGCAGCGGAAATCCTGAAGCGTGCTGAAGCGTCGGCGGCGAGTGCAGAGGAAGCGAAGAAACGGGCAGAGAATG
CCCGGGGACCGGCGGGCGAGAAGGGGGACACAGGTCCACAGGGTGCCACAGGGGCACAGGGACCAGCCGGGGCAACGGGG
GCGGTCGGACCAAAAGGTGAGCCGGGGCCAAAGGGAGAACGGGGAGAAACAGGTCCACAGGGACCGAAGGGCGATAAAGG
TGACCCGGGCGGACCGCCGGGGCCGAAAGGTGACACCGGCCCACGTGGAGAGGCCGGACCACCCGGACCACAGGGTCCGG
CAGGGCAAACCGGCCCGAAAGGGGATAAAGGTGAACCCGGCGCAACAGGTCCGGCAGGTCCCGCAGGCCCTCGGGGAGAA
ACCGGCCCCGCAGGTCCTGCGGGTCCCGCAGGCAGTGTCGCCAGTGTTCCGGATGCCAGCACATCACAGAAAGGTGTTGT
ACAGCTGAGCAGCGATACCAACAGCGATGATGAAACAAAAGCGGCAACCCCAAAGGCTGTGAAAGCGGTAATGGCAGAAG
TGCAGGCAGCAAAAACGAAGGCAGAAGAGGCAGCAACCCGGGCAGCAGTCCCCGGACCGAAGGGGGACAGGGGGGAACCT
GGCGCACCTGGTGCAGTGGGTCCCGCAGGCCCACGGGGACCGGCTGGTGCAGCTGGTCCCAAAGGTGATGCAGGCCCGGC
AGGCCCCGCAGGAAAGGATGGTACCGCCGGAGCGGAAGGTAAGGCAGGTCCGGCAGGGCCACGAGGTGAAAGGGGACCAG
CGGGGGCACAGGGTGTTCCGGGGCCGGTTGGTCCGGCAGGTCCTGCGGGTAAAACGGGGCCACGAGGTTTGCAGGGAGAA
ACAGGAAGACAGGGCCCGACAGGTCCACAGGGCCCGACAGGTGAACCCGGACCACAGGGGCCAACCGGAAGGCTGGTACC
CGGGGAAATTTACAGCATCGGAACATACATTATTGCCGCACTAGGCCCGTATATAACCGACATCGGCAGAACCTATCAGC
CAGGAGAAACTGTATCGGGTTCACGCCTTAAGCGATGCGCCCTAATCAAAGACGAAAACGGAAACTATATGAAAGCTAAC
ACCGATGGCATTGACGGCAACCTATCCTCAGTTCCGGGGTCATGGATGGTGTGTAATGAAATTACGTCGACAAATGACAA
TGAAGGCATCGGGCTGTTCCAGCGCGCATACTGA

Upstream 100 bases:

>100_bases
CTTTGACTGACGGCACCCTTTAACACCAGCCAGTCACAATTTATACCCCTGATCGCAGACCGGGTAACCGGTACTGCGGT
TTTTTTTATGGGAGAAATCT

Downstream 100 bases:

>100_bases
CAGACAGGAGATGACATGAATGTGGAAAAAAATAAGCAATCCGCAATGGGCAGATAAAGATCACACTGCTGTCAATTGCA
TGGTGAAGTTTGAGCACATT

Product: putative tail fiber protein from prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKAD
SEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATG
AVGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGE
TGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEP
GAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGE
TGRQGPTGPQGPTGEPGPQGPTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKAN
TDGIDGNLSSVPGSWMVCNEITSTNDNEGIGLFQRAY

Sequences:

>Translated_517_residues
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKAD
SEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATG
AVGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGE
TGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEP
GAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGE
TGRQGPTGPQGPTGEPGPQGPTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKAN
TDGIDGNLSSVPGSWMVCNEITSTNDNEGIGLFQRAY
>Mature_516_residues
TVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRVTLNTEGYAPSYVGDILVKADS
EPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEASAASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATGA
VGPKGEPGPKGERGETGPQGPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGET
GPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTKAEEAATRAAVPGPKGDRGEPG
APGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEGKAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGET
GRQGPTGPQGPTGEPGPQGPTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKANT
DGIDGNLSSVPGSWMVCNEITSTNDNEGIGLFQRAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI183583553, Length=333, Percent_Identity=34.5345345345345, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI115392133, Length=287, Percent_Identity=37.9790940766551, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI89363017, Length=297, Percent_Identity=40.0673400673401, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI5803080, Length=312, Percent_Identity=37.5, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4502961, Length=330, Percent_Identity=36.0606060606061, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI65301115, Length=185, Percent_Identity=41.0810810810811, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI56847616, Length=152, Percent_Identity=46.0526315789474, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI115527070, Length=330, Percent_Identity=33.030303030303, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI48762934, Length=248, Percent_Identity=39.1129032258064, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI110735435, Length=348, Percent_Identity=35.0574712643678, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI122937273, Length=266, Percent_Identity=35.3383458646617, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI40805823, Length=394, Percent_Identity=28.1725888324873, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI32140760, Length=335, Percent_Identity=36.4179104477612, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI115527062, Length=292, Percent_Identity=39.041095890411, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI111118976, Length=341, Percent_Identity=38.41642228739, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI18780273, Length=291, Percent_Identity=35.7388316151203, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI119829187, Length=270, Percent_Identity=37.037037037037, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI115527066, Length=292, Percent_Identity=39.041095890411, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI38570073, Length=357, Percent_Identity=35.0140056022409, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI111118970, Length=333, Percent_Identity=35.1351351351351, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI11386161, Length=331, Percent_Identity=35.9516616314199, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI111118968, Length=333, Percent_Identity=35.1351351351351, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI154759255, Length=311, Percent_Identity=33.4405144694534, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI111118974, Length=341, Percent_Identity=38.41642228739, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI111118972, Length=333, Percent_Identity=35.1351351351351, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI156616290, Length=283, Percent_Identity=34.2756183745583, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4502951, Length=315, Percent_Identity=38.4126984126984, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI38570075, Length=357, Percent_Identity=33.0532212885154, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI18105016, Length=97, Percent_Identity=50.5154639175258, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI18105018, Length=97, Percent_Identity=50.5154639175258, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI145701009, Length=97, Percent_Identity=50.5154639175258, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI148536825, Length=297, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI110349772, Length=325, Percent_Identity=37.5384615384615, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=53.6585365853659, Blast_Score=129, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI71992048, Length=324, Percent_Identity=38.5802469135802, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17569903, Length=112, Percent_Identity=48.2142857142857, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17137252, Length=330, Percent_Identity=35.1515151515151, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24581820, Length=362, Percent_Identity=36.4640883977901, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24581822, Length=362, Percent_Identity=36.4640883977901, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24581824, Length=362, Percent_Identity=36.4640883977901, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI45549584, Length=123, Percent_Identity=47.1544715447154, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221379525, Length=116, Percent_Identity=43.1034482758621, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221379533, Length=116, Percent_Identity=43.1034482758621, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 50778; Mature: 50647

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRV
CEEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEE
TLNTEGYAPSYVGDILVKADSEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEAS
EECCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATGAVGPKGEPGPKGERGETGPQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTK
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
AEEAATRAAVPGPKGDRGEPGAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGEPGPQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKAN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCEEEEC
TDGIDGNLSSVPGSWMVCNEITSTNDNEGIGLFQRAY
CCCCCCCHHCCCCCEEEECCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
TVRISGVLKDGTGKPVPGCTIELKARRTTETVIVTTVAQGQPGETGSYSFDVEPGWYRV
EEEEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCEEEECCCCEEEE
TLNTEGYAPSYVGDILVKADSEPGTLNKFLMEQDEAQYYPKALAELEAVAAEILKRAEAS
EECCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASAEEAKKRAENARGPAGEKGDTGPQGATGAQGPAGATGAVGPKGEPGPKGERGETGPQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPKGDKGDPGGPPGPKGDTGPRGEAGPPGPQGPAGQTGPKGDKGEPGATGPAGPAGPRGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPAGPAGPAGSVASVPDASTSQKGVVQLSSDTNSDDETKAATPKAVKAVMAEVQAAKTK
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
AEEAATRAAVPGPKGDRGEPGAPGAVGPAGPRGPAGAAGPKGDAGPAGPAGKDGTAGAEG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KAGPAGPRGERGPAGAQGVPGPVGPAGPAGKTGPRGLQGETGRQGPTGPQGPTGEPGPQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTGRLVPGEIYSIGTYIIAALGPYITDIGRTYQPGETVSGSRLKRCALIKDENGNYMKAN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCEEEEC
TDGIDGNLSSVPGSWMVCNEITSTNDNEGIGLFQRAY
CCCCCCCHHCCCCCEEEECCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]