| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218688863
Identifier: 218688863
GI number: 218688863
Start: 1066582
End: 1067586
Strand: Direct
Name: 218688863
Synonym: ECED1_1051
Alternate gene names: NA
Gene position: 1066582-1067586 (Clockwise)
Preceding gene: 218688862
Following gene: 218688864
Centisome position: 20.47
GC content: 57.61
Gene sequence:
>1005_bases TTGTGCTGGCGACACCGACGGAGACGGACGGTGCGCTGTTTCCCGGTCGCATCATGCTGGCGAACACCTGTATGTGGACC TACCGCTCTGATGAGTGTGGTTACACGGGCGGGGCTGTGGCGGATGAGTTCGATAAACCCACCACGGATATCCGTAAGGA CAGATGCAGCAAGTGCATGCGCGGGTGTGAACTGCGCAGGAATGTCGGCAATTTTGGCGGTTTCCTTTCCATCAATAAAC TTTCGCAGTAAATCCTGTTTTATGACACAGACTGAATCAGCGATTCTGGCGCATGCCCGGCGGTGTGCGCCTGCGGAGTC GTGCGGCTTCGTGATAAGCACGCCGGAGGGGGAGCGGTATATCCCTTGTGTGAATATTTCCGCAGAGCCGGAGGCGTATT TTCGTATCGCACCGGAAGACTGGCTGCGGGCAGAGATGCAGGGGGAGATTGTGGCACTGGTCCACAGTCATCCCGGTGGT CTGCCCTGGCTGAGCGAGGCCGACCGGCGGCTGCAGATAAAAAGCGCACTGCCCTGGTGGCTGGTCAGCCGGGGTGACAT TCACAAATTCCGCTGTGTGCCACATCTGACAGGACGGCGCTTTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGG ATGCTTATCATCTGGCGGGGACTGAAATGCCGGATTTTCATCGCGAGGATGACTGGTGGCGCAACGGCCAGAACCTGTAC CTGGATAATCTGGAGGCCACAGGGCTGTATCAGGTGCCGTTGTCATCAGCACAACCGGGCGATGTGCTGCTGTGCTGCTT TGGTGCTTCGGTACCGAACCATGCCGCCATTTACTGTGGCAACGGTGAGCTGCTTCACCATCTGCCTGAACAACTGAGTA AACGGGAGAGGTATTCCGAAAAATGGCAACGACGAACGCATTCTGTCTGGCGTCACCGCCACTGGCACGCATCTGCCTTC ACGGGGATTTACAACGATTTGGCCGCCGCCTCAGCCTGTATGTGA
Upstream 100 bases:
>100_bases AACTTTGTGGCAGGCAATCCTGAGGCAGACCCGGAGCAGGAGCTGACGGACCGGTGGGTGGTGGAGCAGATGTCAGCGCT GACGTCCATGACGGCCTCGT
Downstream 100 bases:
>100_bases ACACGGCAGCGGAAGCCATCCGGGCGCTGTCGTTACAGGTGCCCGGATTCCGCCGTCAGATGAACGAAGGCTGGTACCAG ATACGTATTGCCGGTGAGGA
Product: tail fiber component K
Products: NA
Alternate protein names: Tail Assembly Protein; Tail Assembly Protein K; Phage Minor Tail Protein; Phage Tail Assembly Protein; Prophage LambdaSo Tail Assembly Protein K; Phage Protein; Gifsy-2 Prophage Tail Assembly Protein; Prophage LambdaSo Minor Tail Protein L; Tail Fiber Component K Of Prophage; Phage-Related Tail Assembly Protein K; Phage Tail Protein; Metal-Dependent Protease; Tail Assembly Protein K-Like; Tail Fiber Component K; Tail Fiber Component; NlpC/P60 Family Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MCWRHRRRRTVRCFPVASCWRTPVCGPTALMSVVTRAGLWRMSSINPPRISVRTDAASACAGVNCAGMSAILAVSFPSIN FRSKSCFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGG LPWLSEADRRLQIKSALPWWLVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY LDNLEATGLYQVPLSSAQPGDVLLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAF TGIYNDLAAASACM
Sequences:
>Translated_334_residues MCWRHRRRRTVRCFPVASCWRTPVCGPTALMSVVTRAGLWRMSSINPPRISVRTDAASACAGVNCAGMSAILAVSFPSIN FRSKSCFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGG LPWLSEADRRLQIKSALPWWLVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY LDNLEATGLYQVPLSSAQPGDVLLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAF TGIYNDLAAASACM >Mature_334_residues MCWRHRRRRTVRCFPVASCWRTPVCGPTALMSVVTRAGLWRMSSINPPRISVRTDAASACAGVNCAGMSAILAVSFPSIN FRSKSCFMTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGG LPWLSEADRRLQIKSALPWWLVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY LDNLEATGLYQVPLSSAQPGDVLLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSEKWQRRTHSVWRHRHWHASAF TGIYNDLAAASACM
Specific function: Unknown
COG id: COG1310
COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37740; Mature: 37740
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCWRHRRRRTVRCFPVASCWRTPVCGPTALMSVVTRAGLWRMSSINPPRISVRTDAASAC CCCCCCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEEECCHHHHH AGVNCAGMSAILAVSFPSINFRSKSCFMTQTESAILAHARRCAPAESCGFVISTPEGERY CCCCHHHHHEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHCCEEEECCCCCEE IPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALPWW EEEEECCCCCCEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHCCCCEEEECCCCCEE LVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY EECCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEE LDNLEATGLYQVPLSSAQPGDVLLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSE EECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH KWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCWRHRRRRTVRCFPVASCWRTPVCGPTALMSVVTRAGLWRMSSINPPRISVRTDAASAC CCCCCCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEEECCHHHHH AGVNCAGMSAILAVSFPSINFRSKSCFMTQTESAILAHARRCAPAESCGFVISTPEGERY CCCCHHHHHEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHCCEEEECCCCCEE IPCVNISAEPEAYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQIKSALPWW EEEEECCCCCCEEEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHCCCCEEEECCCCCEE LVSRGDIHKFRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGTEMPDFHREDDWWRNGQNLY EECCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEE LDNLEATGLYQVPLSSAQPGDVLLCCFGASVPNHAAIYCGNGELLHHLPEQLSKRERYSE EECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH KWQRRTHSVWRHRHWHASAFTGIYNDLAAASACM HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA