| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is 218688858
Identifier: 218688858
GI number: 218688858
Start: 1062853
End: 1063266
Strand: Direct
Name: 218688858
Synonym: ECED1_1046
Alternate gene names: NA
Gene position: 1062853-1063266 (Clockwise)
Preceding gene: 218688857
Following gene: 218688859
Centisome position: 20.4
GC content: 56.04
Gene sequence:
>414_bases ATGGGGAGGCCTGACTGGCGCGCCATGCTTGCCGGGATGACATCCACCGAATATGCCGACTGGCGACATTTTTACCGCAC GCATTATTTTCAGGATACCCAACTGGATATGCATTTTTCCGGGCTGATGTACGCCGTACTCAGCCTGTTTTTTTGCGATC CGGATATGCATCCCTCGGATTTCAGTCTGCTTGTCCCCCGGCATGAGGAAGAGCAGGTGGAGAGGCCGGATGAGGACAAA ATGCTGATGCAGAAAGCGGCAGGACTTGCCGGAGGCGTCCGGTTCGGTGGGGACGGAGGGCGCGATATTTTATCGTCTGC GGATGTGGCGGATGTCATGGTGGATGATGCCGCATTAATGATGGCTTCAGCGGGGATTCCGGGAGGTGTGAGATATGTCC CAGCCGGTTGGTGA
Upstream 100 bases:
>100_bases GCACCGAAGTGGCGAAAAATAACGCGCTTACTGATGATGATTTTTCTGCGGGAAAGTTTTCGACGGCGAGCTGAATTTTG CCCTCAGACTGGCGCGTGAG
Downstream 100 bases:
>100_bases TCTTGTTATTGACCTGAGTCTGGATGCTGTCCGTTTCGATGAGCAGATGAGCCGGGTAAGGCGTCATTTTTCAGGTCTGG ATACCGACGCCAGAAAAACC
Product: minor tail protein T
Products: NA
Alternate protein names: Phage Tail Assembly Protein T; Tail Component; Minor Tail Protein; Phage Minor Tail Protein T
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MGRPDWRAMLAGMTSTEYADWRHFYRTHYFQDTQLDMHFSGLMYAVLSLFFCDPDMHPSDFSLLVPRHEEEQVERPDEDK MLMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALMMASAGIPGGVRYVPAGW
Sequences:
>Translated_137_residues MGRPDWRAMLAGMTSTEYADWRHFYRTHYFQDTQLDMHFSGLMYAVLSLFFCDPDMHPSDFSLLVPRHEEEQVERPDEDK MLMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALMMASAGIPGGVRYVPAGW >Mature_136_residues GRPDWRAMLAGMTSTEYADWRHFYRTHYFQDTQLDMHFSGLMYAVLSLFFCDPDMHPSDFSLLVPRHEEEQVERPDEDKM LMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALMMASAGIPGGVRYVPAGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15268; Mature: 15137
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRPDWRAMLAGMTSTEYADWRHFYRTHYFQDTQLDMHFSGLMYAVLSLFFCDPDMHPSD CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC FSLLVPRHEEEQVERPDEDKMLMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALM CEEECCCCCHHHHCCCCHHHHHHHHHCCCCCCCEECCCCCHHHHCCCCHHHHHHHHHHHH MASAGIPGGVRYVPAGW HHHCCCCCCCEECCCCC >Mature Secondary Structure GRPDWRAMLAGMTSTEYADWRHFYRTHYFQDTQLDMHFSGLMYAVLSLFFCDPDMHPSD CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC FSLLVPRHEEEQVERPDEDKMLMQKAAGLAGGVRFGGDGGRDILSSADVADVMVDDAALM CEEECCCCCHHHHCCCCHHHHHHHHHCCCCCCCEECCCCCHHHHCCCCHHHHHHHHHHHH MASAGIPGGVRYVPAGW HHHCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA