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The map label for this gene is rz [H]

Identifier: 218688843

GI number: 218688843

Start: 1051582

End: 1052055

Strand: Direct

Name: rz [H]

Synonym: ECED1_1031

Alternate gene names: 218688843

Gene position: 1051582-1052055 (Clockwise)

Preceding gene: 218688842

Following gene: 218688844

Centisome position: 20.19

GC content: 54.64

Gene sequence:

>474_bases
GTGAACATAAACCGAATGCTTTCCGCGTTTATCGTTATTCTGCTGGTGGCCTGTGGAGCGCTGTGGATGGCAACAGACCA
TTACCGTGATAACGCGATTACCTACAAAGCGCAGCGCGATAACAAAGCCAGTGAACTGAAGCTGGCGAACGCAACCATTA
CTGATATGCAGGTGCGCCAGCGCGATGTTGCTGCGCTCGATGCAAAATACTCGAGGGAATTAGCCGATGCGAGAGCTGAA
AATGAAACTTTTCGCGCTGACGTTGCCGCTGGTCGTAAGCGCCTGCGTATCAACGCCACCTGTCCAGGTCCCGTGCGTGA
AGCCACCGGCACCGCCCGCGTGGATAATGCAACCGGCCCCCGACTGGCAGACACCGTTACACGGGATTATTTCACCCTCA
GAGAGCGGCTGATGACGATGCAGAAGCAACTGGAAGGGGCGCAGGAATATATCCGTACTCAGTGCATTAAGTAG

Upstream 100 bases:

>100_bases
AGATCCTCTGTGTAATTGTCGGCATTTCATTTTCACTAATGCTGGTTGCTCTTTTTCTTTCCATGGCCTGGATGATGTTG
TCTTCGTCGGGGCTGCTGGG

Downstream 100 bases:

>100_bases
TCTTTTTATTATCCGGAGGATGTATGAAGAAATTACTGGTAACCGTAAAGCCTTTTCAGGGAACAATTCCGTTCCGTATT
TTGCAGCGTGGTCGTGTTCT

Product: Endopeptidase (Lysis protein) from bacteriophage origin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNINRMLSAFIVILLVACGALWMATDHYRDNAITYKAQRDNKASELKLANATITDMQVRQRDVAALDAKYSRELADARAE
NETFRADVAAGRKRLRINATCPGPVREATGTARVDNATGPRLADTVTRDYFTLRERLMTMQKQLEGAQEYIRTQCIK

Sequences:

>Translated_157_residues
MNINRMLSAFIVILLVACGALWMATDHYRDNAITYKAQRDNKASELKLANATITDMQVRQRDVAALDAKYSRELADARAE
NETFRADVAAGRKRLRINATCPGPVREATGTARVDNATGPRLADTVTRDYFTLRERLMTMQKQLEGAQEYIRTQCIK
>Mature_157_residues
MNINRMLSAFIVILLVACGALWMATDHYRDNAITYKAQRDNKASELKLANATITDMQVRQRDVAALDAKYSRELADARAE
NETFRADVAAGRKRLRINATCPGPVREATGTARVDNATGPRLADTVTRDYFTLRERLMTMQKQLEGAQEYIRTQCIK

Specific function: Necessary for host cell lysis. It is believed to code for an endopeptidase that cleaves the amino-carboxyl cross-link between the diaminopimelic acid and D-alanine residues in the murein component of the bacterial cell wall [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786769, Length=136, Percent_Identity=71.3235294117647, Blast_Score=193, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004929 [H]

Pfam domain/function: PF03245 Phage_lysis [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 17698; Mature: 17698

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINRMLSAFIVILLVACGALWMATDHYRDNAITYKAQRDNKASELKLANATITDMQVRQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHEEECCCHHHHHHHHH
RDVAALDAKYSRELADARAENETFRADVAAGRKRLRINATCPGPVREATGTARVDNATGP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCC
RLADTVTRDYFTLRERLMTMQKQLEGAQEYIRTQCIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNINRMLSAFIVILLVACGALWMATDHYRDNAITYKAQRDNKASELKLANATITDMQVRQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHEEECCCHHHHHHHHH
RDVAALDAKYSRELADARAENETFRADVAAGRKRLRINATCPGPVREATGTARVDNATGP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCC
RLADTVTRDYFTLRERLMTMQKQLEGAQEYIRTQCIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]