Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yfbT [H]
Identifier: 218688826
GI number: 218688826
Start: 1040400
End: 1041044
Strand: Direct
Name: yfbT [H]
Synonym: ECED1_1013
Alternate gene names: 218688826
Gene position: 1040400-1041044 (Clockwise)
Preceding gene: 218688825
Following gene: 218688828
Centisome position: 19.97
GC content: 48.22
Gene sequence:
>645_bases ATGGCAATGATATTCAACGCTAAGGGTTTTTTATTCGATATGGACGGTACGCTGGTTGATTCAACAGCCGTAGTGGAAAG CGTCTGGAGAGATTTTTGTGCAGAATACGGTCTTGATACTCAGGCTGTGATTGCTTACGCACACGGGCGGCAAACGATTG ATACACTGACGCATTTTATTGGTGCAGGTGAGAAAACCAATAAAATCGCGGCCTCACTCGAAGAGGTTGAAATCAACACG ACAGAAGGCGTTACTGAAGTAAAGGGGGCCGCTGCACTCTTATCAAAACTGCCACCGGATAGCTGGGCACTTGTCACTTC TGCAGGCAGAATGCTTGCCGAAAACAGGATGAAAGCGGCTAATCTCCCCTTACCCATAGTAATGGTGTGTGCAGAAGATG TAATGACGGGAAAACCAAGTCCCGAGGGTTACATCAAAGCAGCTTTGGCTTTGGGCCTTGAGCCTGGTGAATGCGTGGTA TTTGAGGATGCATCTGCGGGTATAAAAGCAGGGCTGGCAAGTGGAGCTTCGGTAATAGCTGTTCAGCCTGACGCTCTGGG ATCATCTGAAGCCCATGCCGTCAGCGAACTGTCTGACATTATGGTCAAGATTTCCGGAGAACGTTTCAATATCATCTGTG GTTAA
Upstream 100 bases:
>100_bases TTTCAAGAATTGTGCCTGAGCAGATTGCTGTCAGCCTGAGAGTAGCGAAAGGTGATGAAAAAACATGGTTTGATTAACTT TCTTCTGCAACCATTAAGGA
Downstream 100 bases:
>100_bases TCACGTTACACAATACGCATCAATGGACGCTGAGTAGTTCGCGAGTTTTAAACTTCCAACGTCCGCTTTTCGCTCAAAGC GGACTAGAAGGTTAGCTTGC
Product: putative 2-deoxyglucose-6-phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MAMIFNAKGFLFDMDGTLVDSTAVVESVWRDFCAEYGLDTQAVIAYAHGRQTIDTLTHFIGAGEKTNKIAASLEEVEINT TEGVTEVKGAAALLSKLPPDSWALVTSAGRMLAENRMKAANLPLPIVMVCAEDVMTGKPSPEGYIKAALALGLEPGECVV FEDASAGIKAGLASGASVIAVQPDALGSSEAHAVSELSDIMVKISGERFNIICG
Sequences:
>Translated_214_residues MAMIFNAKGFLFDMDGTLVDSTAVVESVWRDFCAEYGLDTQAVIAYAHGRQTIDTLTHFIGAGEKTNKIAASLEEVEINT TEGVTEVKGAAALLSKLPPDSWALVTSAGRMLAENRMKAANLPLPIVMVCAEDVMTGKPSPEGYIKAALALGLEPGECVV FEDASAGIKAGLASGASVIAVQPDALGSSEAHAVSELSDIMVKISGERFNIICG >Mature_213_residues AMIFNAKGFLFDMDGTLVDSTAVVESVWRDFCAEYGLDTQAVIAYAHGRQTIDTLTHFIGAGEKTNKIAASLEEVEINTT EGVTEVKGAAALLSKLPPDSWALVTSAGRMLAENRMKAANLPLPIVMVCAEDVMTGKPSPEGYIKAALALGLEPGECVVF EDASAGIKAGLASGASVIAVQPDALGSSEAHAVSELSDIMVKISGERFNIICG
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=183, Percent_Identity=49.1803278688525, Blast_Score=151, Evalue=4e-38, Organism=Escherichia coli, GI1789046, Length=189, Percent_Identity=30.1587301587302, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6321834, Length=198, Percent_Identity=35.8585858585859, Blast_Score=104, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321833, Length=192, Percent_Identity=34.8958333333333, Blast_Score=101, Evalue=9e-23, Organism=Saccharomyces cerevisiae, GI6320905, Length=167, Percent_Identity=34.7305389221557, Blast_Score=90, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322136, Length=167, Percent_Identity=34.1317365269461, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22366; Mature: 22235
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMIFNAKGFLFDMDGTLVDSTAVVESVWRDFCAEYGLDTQAVIAYAHGRQTIDTLTHFI CEEEEECCCEEEECCCCEECHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHH GAGEKTNKIAASLEEVEINTTEGVTEVKGAAALLSKLPPDSWALVTSAGRMLAENRMKAA CCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHC NLPLPIVMVCAEDVMTGKPSPEGYIKAALALGLEPGECVVFEDASAGIKAGLASGASVIA CCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHCCCCEEEE VQPDALGSSEAHAVSELSDIMVKISGERFNIICG ECCCCCCCCHHHHHHHHHHHHEEECCCEEEEEEC >Mature Secondary Structure AMIFNAKGFLFDMDGTLVDSTAVVESVWRDFCAEYGLDTQAVIAYAHGRQTIDTLTHFI EEEEECCCEEEECCCCEECHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHH GAGEKTNKIAASLEEVEINTTEGVTEVKGAAALLSKLPPDSWALVTSAGRMLAENRMKAA CCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHC NLPLPIVMVCAEDVMTGKPSPEGYIKAALALGLEPGECVVFEDASAGIKAGLASGASVIA CCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHCCCCEEEE VQPDALGSSEAHAVSELSDIMVKISGERFNIICG ECCCCCCCCHHHHHHHHHHHHEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]