Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is smtA [H]
Identifier: 218688764
GI number: 218688764
Start: 978073
End: 978858
Strand: Direct
Name: smtA [H]
Synonym: ECED1_0951
Alternate gene names: 218688764
Gene position: 978073-978858 (Clockwise)
Preceding gene: 218688762
Following gene: 218688765
Centisome position: 18.77
GC content: 51.65
Gene sequence:
>786_bases ATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACA GGCTATTCTGTGGCAGGATCTCGATCGCGTGCTGGCGGAAATGGGCCCGCAAAAACTGCGTGTGCTGGATGCTGGCGGCG GAGAAGGGCAGACCGCAATCAAAATGGCCGAGCGCGGGCATCAGGTCATTTTATGCGATCTTTCTGCGCAGATGATCGAC CGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTC GCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGACCGATCCCCGCAGCGTATTACAGA CCCTGTGGTCAGTTTTGCGTCCAGGCGGCGTGTTGTCGTTAATGTTCTACAATGCGCATGGTTTGTTGATGCATAACATG GTCGCCGGGAATTTTGATTACGTGCAGGCGGGAATGCCGAAAAAGAAAAAACGGACGCTTTCGCCAGATTATCCACGCGA CCCGGCGCAGGTTTATCTGTGGCTGGAAGAAGCTGGTTGGCAAATTATGGGTAAGACAGGCGTTCGCGTGTTTCATGATT ATCTGCGCGAGAAGCACCAGCAGCGCGACTGCTATGAAGCATTACTTGAATTAGAAACGCGTTATTGCCGTCAGGAACCG TATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGA
Upstream 100 bases:
>100_bases ATCGCCAGCGATATTACACCAGACGGGTTCATTCTCGCCGTGGCTGTGACAAAATAGCGTCTTTATCAGAAAACGTCTTA GCCAACCGGTGGAGAAAGCA
Downstream 100 bases:
>100_bases GTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGA CTCTCTTTTCTGCTGGCGGT
Product: putative metallothionein SmtA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMID RAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVTDPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEP YITLGRYIHVTARKPQSKDKV
Sequences:
>Translated_261_residues MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMID RAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVTDPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEP YITLGRYIHVTARKPQSKDKV >Mature_261_residues MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMID RAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVTDPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEP YITLGRYIHVTARKPQSKDKV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787151, Length=261, Percent_Identity=99.6168582375479, Blast_Score=545, Evalue=1e-156,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29845; Mature: 29845
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAI CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHH KMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA HHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH VLEWVTDPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTL HHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHCCCCHHHCCCC SPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEP CCCCCCCHHHEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YITLGRYIHVTARKPQSKDKV CEEECCEEEEEECCCCCCCCC >Mature Secondary Structure MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAI CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHH KMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA HHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH VLEWVTDPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTL HHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCHHHHCCCCHHHCCCC SPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEP CCCCCCCHHHEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YITLGRYIHVTARKPQSKDKV CEEECCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7513784; 8905232; 9278503; 8566713 [H]