| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is ycaI [H]
Identifier: 218688753
GI number: 218688753
Start: 967589
End: 969853
Strand: Direct
Name: ycaI [H]
Synonym: ECED1_0940
Alternate gene names: 218688753
Gene position: 967589-969853 (Clockwise)
Preceding gene: 218688752
Following gene: 218688754
Centisome position: 18.57
GC content: 49.67
Gene sequence:
>2265_bases ATGAAAATAACGACAGTCGGCGTATGCATAATTTGCGGAATTTTTCCGTTGCTGATTTTGCCCCAATTGCCAGGGACAGT AACCCTTGCGTTTCTGACTCTCTTCGCCTGTGTACTGGCATTTATCCCTGTTAAAACCGTCCGTTATATCGCGCTGACGT TGCTGTTTTTCGTTTGGGGCATATTAGCAGCAAAGCAAATTTTGTGGGCAGGAGAAACCTTAACTGGCGCGACGCAGGAT GCAATTGTTGAGATCATTGCTACTGACGGCATGACCACTCATTACGGTCAAATTACTCATCTACAAGGTCGACGTATATT CCCTGCGCCAGGCCTCGTACTGTATGGCGAATATCTTCCGCAAGCGGTTTGTGCCGGACAAGTATGGTCAATGAAACTCA AAGTTCGTGCAGTTCATGGTCAACTTAATGATGGCGGCTTTGATAGCCAGCGTTATGCCATTGCCCAGCATCAACCGCTC ACCGGCCGTTTTCTGCAGGCAAGTGTCATTGAACCGAATTGTAGCCTGCGTGCACAGTATCTGGCGTCACTACAAACAAC GCTGCAACCCTATATGTGGAACGCGGTTATTCTTGGATTAGGTATGGGGGAACGGTTATCCGTCCCCAAAGAAATCAAAA ATATCATGCGTGATACTGGAACGGCGCATTTAATGGCGATATCAGGATTGCACATCGCTTTTGCGGCGTTGCTGGCTGCA GGACTCATTCGCGGTGGGCAAGTTTTTCTGCCTGGGTGCTGGATCCACTGGCAAATGCCATTAATTGGTGGAATCTGCTG TGCTGCTTTTTATGCCTGGCTTACGGGAATGCAACCTCCTGCATTGCGTACCGTGGTGGCGCTTGCCATTTGGGGAATGC TTAAGTTAAGTGGACGACAATGGAGTGGCTGGGATGTATGGATATGTTGTCTGGCGGCAATTTTGCTGATGGATCCTGTT GCCATTCTCTCGCAAAGTTTATGGCTCTCTGCCGCTGCGGTCGCGGCACTGATTTTTTGGTATCAGTGGTTTCCCTGTCC GGAGTGGCAGCTGCCGCCGGTATTGCGCGCGGTTGTTTCCCTCATCCATCTGCAACTGGGAATCACCCTCCTGCTTATGC CCGTGCAAATTGTCATATTTCATGGCATTAGTCTGACCTCGTTTATTGCAAATCTTTTTGCAATTCCCCTGGTGACATTT ATCACGGTTCCGTTGATTCTCGCCGCGATGGTTGTGCATTTAAGCGGGCCGTTTATTCTGGAACAAGGGTTATGGTTTCT TGCCGACCGGTCTTTGGCTTTACTTTTCTGGGGGTTAAAGAGTTTGCCGGAAGGGTGGATCAACATTGCTGAACGTTGGC AATGGCTAACATTTTCCCCATGGTTCTTACTGGTGGTATGGCGATTAAACGCCTGGCGAACGTTGCCAGCAATGTGTGTG GCTGTAGGCTTGCTGATGTGCTTGCCGCTGTGGCAAAAACCTCGACCTGACGAGTGGCAAGTGTACATGCTTGATGTCGG GCAAGGGCTGGCAATGGTCATTGCGCGAAACGGCAAAGCGATTCTCTATGACACGGGACTGGCCTGGCCCGAAGGGGATA GTGGGCAACAACTGATTATCCCCTGGCTCCACTGGCATAATCTTGAACCGGAAGGCGTTATTTTGAGTCATGAACATCTG GATCACCGGGGAGGGCTGGACTCAATATTGCACACATGGCCGATGTTATGGATCCGAAGTCCGTTAAACTGGGAACATCA TCAGCCCTGTGTGCGTGGCGAAGCGTGGCAATGGCAAGGATTGCGTTTCAGCGCGCACTGGCCTTTACAAGGTAGCAACG ATAAAGGAAATAACCATTCCTGTGTGGTTAAGATTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCC CCCGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAATGCAGGCAACATTACTTCAGGTACCTCACCATGGCAGTAA TACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGC GACTGCCCTCAAGCAAAGTTAAACATCGCTATCAACAACAGGGCTATAAGTGGCTTGATACTCCACATCAGGGTCAAATA ACGGTCAATTTTTCAGCGCAAGGCTGGCGGATTAGCAGCCTCAGAGAGCAAATTTTACCTCGTTGGTATCATCAGTGGTT TGGCGTGCCAGTGGATAACGGGTAG
Upstream 100 bases:
>100_bases CCTATCGTTAAATTCTTCTGAACGTGCCTCGGGGAACGCAAAACTCCCACCAGACAACCGTTCAACAAAGTTGCACACTT TCTATAAACAGGGAGGGTGC
Downstream 100 bases:
>100_bases AATATGCGGCTATTTCAACAAATGCTGGTTTTTTGAATGCATAACGACAAAGATCTCTCTACGTGGCAGACGTTCCGCCG ACTGTGGCCAACCATTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 754
Protein sequence:
>754_residues MKITTVGVCIICGIFPLLILPQLPGTVTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILAAKQILWAGETLTGATQD AIVEIIATDGMTTHYGQITHLQGRRIFPAPGLVLYGEYLPQAVCAGQVWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL TGRFLQASVIEPNCSLRAQYLASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQVFLPGCWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALAIWGMLKLSGRQWSGWDVWICCLAAILLMDPV AILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTF ITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFWGLKSLPEGWINIAERWQWLTFSPWFLLVVWRLNAWRTLPAMCV AVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHL DHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKIDDGTNSILLTGDIEA PAEQKMLSRYWQQMQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSSKVKHRYQQQGYKWLDTPHQGQI TVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG
Sequences:
>Translated_754_residues MKITTVGVCIICGIFPLLILPQLPGTVTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILAAKQILWAGETLTGATQD AIVEIIATDGMTTHYGQITHLQGRRIFPAPGLVLYGEYLPQAVCAGQVWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL TGRFLQASVIEPNCSLRAQYLASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQVFLPGCWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALAIWGMLKLSGRQWSGWDVWICCLAAILLMDPV AILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTF ITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFWGLKSLPEGWINIAERWQWLTFSPWFLLVVWRLNAWRTLPAMCV AVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHL DHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKIDDGTNSILLTGDIEA PAEQKMLSRYWQQMQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSSKVKHRYQQQGYKWLDTPHQGQI TVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG >Mature_754_residues MKITTVGVCIICGIFPLLILPQLPGTVTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILAAKQILWAGETLTGATQD AIVEIIATDGMTTHYGQITHLQGRRIFPAPGLVLYGEYLPQAVCAGQVWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL TGRFLQASVIEPNCSLRAQYLASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA GLIRGGQVFLPGCWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALAIWGMLKLSGRQWSGWDVWICCLAAILLMDPV AILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTF ITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFWGLKSLPEGWINIAERWQWLTFSPWFLLVVWRLNAWRTLPAMCV AVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHL DHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKIDDGTNSILLTGDIEA PAEQKMLSRYWQQMQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSSKVKHRYQQQGYKWLDTPHQGQI TVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=754, Percent_Identity=96.1538461538462, Blast_Score=1445, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 84495; Mature: 84495
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITTVGVCIICGIFPLLILPQLPGTVTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWG CCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAAKQILWAGETLTGATQDAIVEIIATDGMTTHYGQITHLQGRRIFPAPGLVLYGEYLP HHHHHHHHHCCCCCCCCCHHHHEEEEECCCCEECCCCEEEECCCEECCCCCEEEEHHHHH QAVCAGQVWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQY HHHHCCCCEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHH LASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA HHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH GLIRGGQVFLPGCWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALAIWGMLKLSGRQ HHHCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC WSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVS CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFIL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EQGLWFLADRSLALLFWGLKSLPEGWINIAERWQWLTFSPWFLLVVWRLNAWRTLPAMCV HCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCEEEECHHHHHHHHHHCCHHHHHHHHH AVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLII HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCEEEE PWLHWHNLEPEGVILSHEHLDHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQG EEHHHCCCCCCCEEEECHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC LRFSAHWPLQGSNDKGNNHSCVVKIDDGTNSILLTGDIEAPAEQKMLSRYWQQMQATLLQ EEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH VPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSSKVKHRYQQQGYKWLDTPHQGQI CCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCEE TVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKITTVGVCIICGIFPLLILPQLPGTVTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWG CCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAAKQILWAGETLTGATQDAIVEIIATDGMTTHYGQITHLQGRRIFPAPGLVLYGEYLP HHHHHHHHHCCCCCCCCCHHHHEEEEECCCCEECCCCEEEECCCEECCCCCEEEEHHHHH QAVCAGQVWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQY HHHHCCCCEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHH LASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA HHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH GLIRGGQVFLPGCWIHWQMPLIGGICCAAFYAWLTGMQPPALRTVVALAIWGMLKLSGRQ HHHCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC WSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVS CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFIL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EQGLWFLADRSLALLFWGLKSLPEGWINIAERWQWLTFSPWFLLVVWRLNAWRTLPAMCV HCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCEEEECHHHHHHHHHHCCHHHHHHHHH AVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLII HHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCEEEE PWLHWHNLEPEGVILSHEHLDHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQG EEHHHCCCCCCCEEEECHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC LRFSAHWPLQGSNDKGNNHSCVVKIDDGTNSILLTGDIEAPAEQKMLSRYWQQMQATLLQ EEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH VPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSSKVKHRYQQQGYKWLDTPHQGQI CCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCEE TVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8094880 [H]