| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is R
Identifier: 218688696
GI number: 218688696
Start: 921315
End: 921782
Strand: Reverse
Name: R
Synonym: ECED1_0883
Alternate gene names: NA
Gene position: 921782-921315 (Counterclockwise)
Preceding gene: 218688698
Following gene: 218688695
Centisome position: 17.69
GC content: 53.85
Gene sequence:
>468_bases ATGCTGAAAATTAACACCCTGCGCGACGCCATGACTGACGCCTGCCCATGGTGTCGCGCCAACCCGGAGAAATTCACTGT GTATGTGAATAACGGAGGCATTGAGACGACCGGCGAATCCCCCTCATATCTTTACCGTTACACGCTTGGGATCTTTGTCA TGGACTTCACGCAGGATCTCGATGAACTGATGGTGCCGCTGATGCGCTGGCTGTACCGCAATCAGCCTGATCTCCTGCTT AATCCGGAGAAAAACAGGGATATCAAATTTTCTGTTGCCATCAATGACGACGACAGCACCGATATCCTGCTGGAAATCCC GGTATGGGAGCGGGTGATTATCCGCCGTAATGATGATGGCACTGTTCACGCAGAACACATCGGAGAGCCGCCTGTCAGCC GGGCCCTGGAAGCATGGCGCGTCACCCTCGAAGATGTCACATGGGGTCAGAATGATGGCTCCGGATGA
Upstream 100 bases:
>100_bases TTATTTTCAGCGAAAAATTGACGAGCGCGCCGCTGAAAAAATCAGTCAGAAGTCTGCACAACAGAACAACCAGAACATGC CATAACACACAGGAGGGGGC
Downstream 100 bases:
>100_bases CCTGCACAGACTGGACGGTCTCTTTCAGGAGATCCTCAGTGGTTTGTCCGCTGCCGGTATAAACAAAACAGCCCGTGCTG TCGGTCAGGCTGTCCGCGCC
Product: phage tail completion protein R
Products: NA
Alternate protein names: Tail Completion Protein R; P2 Phage Tail Completion Protein R; Phage Tail Completion Protein R; Phage Tail Protein; Bacteriophage P2 Tail Completion Protein GPR; Phage-Related Tail Completion Protein; Bacteriophage Tail Completion Protein R; Tail Completion Protein; Bacteriophage Tail Completion Protein GpR-Like Protein; Phage-Related Tail Protein; P2 Phage Tail Completion Protein R GpR; Prophage Tail Completion Protein; Phage Tail Completion Protein GpR; Phage Tail Completion R Family Protein; Tail Completion-Like Protein; Bacteriophage Tail Completion-Like Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLKINTLRDAMTDACPWCRANPEKFTVYVNNGGIETTGESPSYLYRYTLGIFVMDFTQDLDELMVPLMRWLYRNQPDLLL NPEKNRDIKFSVAINDDDSTDILLEIPVWERVIIRRNDDGTVHAEHIGEPPVSRALEAWRVTLEDVTWGQNDGSG
Sequences:
>Translated_155_residues MLKINTLRDAMTDACPWCRANPEKFTVYVNNGGIETTGESPSYLYRYTLGIFVMDFTQDLDELMVPLMRWLYRNQPDLLL NPEKNRDIKFSVAINDDDSTDILLEIPVWERVIIRRNDDGTVHAEHIGEPPVSRALEAWRVTLEDVTWGQNDGSG >Mature_155_residues MLKINTLRDAMTDACPWCRANPEKFTVYVNNGGIETTGESPSYLYRYTLGIFVMDFTQDLDELMVPLMRWLYRNQPDLLL NPEKNRDIKFSVAINDDDSTDILLEIPVWERVIIRRNDDGTVHAEHIGEPPVSRALEAWRVTLEDVTWGQNDGSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17832; Mature: 17832
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKINTLRDAMTDACPWCRANPEKFTVYVNNGGIETTGESPSYLYRYTLGIFVMDFTQDL CEEECHHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCEEEEEEEEHEEEHHHHHH DELMVPLMRWLYRNQPDLLLNPEKNRDIKFSVAINDDDSTDILLEIPVWERVIIRRNDDG HHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEECCCC TVHAEHIGEPPVSRALEAWRVTLEDVTWGQNDGSG EEEHHHCCCCCHHHHHHHHEEEEHHCCCCCCCCCC >Mature Secondary Structure MLKINTLRDAMTDACPWCRANPEKFTVYVNNGGIETTGESPSYLYRYTLGIFVMDFTQDL CEEECHHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCEEEEEEEEHEEEHHHHHH DELMVPLMRWLYRNQPDLLLNPEKNRDIKFSVAINDDDSTDILLEIPVWERVIIRRNDDG HHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEECCCC TVHAEHIGEPPVSRALEAWRVTLEDVTWGQNDGSG EEEHHHCCCCCHHHHHHHHEEEEHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA