Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is ybhA [H]
Identifier: 218688551
GI number: 218688551
Start: 756609
End: 757427
Strand: Reverse
Name: ybhA [H]
Synonym: ECED1_0728
Alternate gene names: 218688551
Gene position: 757427-756609 (Counterclockwise)
Preceding gene: 218688557
Following gene: 218688546
Centisome position: 14.54
GC content: 51.28
Gene sequence:
>819_bases ATGACCACACGCGTGATTGCTCTCGACTTAGACGGCACCTTATTGACCCCGAAAAAGACCTTGCTTCCATCATCGATAGA AGCCCTGGCCCGCGCTCGCGAAGCAGGCTATCAATTAATCATCGTCACAGGTCGCCATCACGTCGCTATTCATCCTTTTT ATCAGGCGCTGGCGCTGGATACACCTGCTATTTGCTGTAATGGCACCTATTTGTATGATTATCATGCAAAAACCGTGCTG GAAGCGGACCCAATGCCCGTTAATAAAGCCCTGCAACTCATTGAGATGCTGAATGAACACCACATTCACGGTCTGATGTA TGTCGATGATGCAATGGTCTATGAGCACCCGACCGGGCATGTCATTCGCACGTCTAACTGGGCGCAAACCCTGCCGCCGG AACAGCGTCCGACTTTCACACAAGTCGCTTCTCTGGCTGAAACGGCGCAACAAGTTAACGCCGTATGGAAGTTCGCCCTG ACGCACGATGACCTGCCGCAATTGCAGCATTTTGGTAAGCATGTCGAACATGAACTGGGACTGGAGTGTGAATGGTCCTG GCACGATCAGGTTGATATTGCACGCGGCGGCAACAGCAAAGGTAAACGTTTGACGAAATGGGTTGAGGCACAAGGCTGGT CGATGGAAAACGTCGTGGCGTTCGGCGATAACTTCAATGATATTAGTATGCTGGAAGCCGCTGGTACAGGCGTAGCGATG GGCAACGCCGATGACGCAGTAAAAGCGCGCGCCAACATTGTGATTGGTGATAACACCACCGACAGCATTGCCCAGTTCAT TTATAGCTACCTGATTTAA
Upstream 100 bases:
>100_bases GGCGGTGAATGCTGAATTAAAACGCAGAATTTTGTCCGATAGTGGTATCGGTGTACCATTCGCGCAGACGAAAATTCTTA ACCTTAATCTGGAATACGCC
Downstream 100 bases:
>100_bases TCAGGCGGTTATCGACACACTTTTAATTTGCGCATACAGCCACAGGCCAGGTTTGATCGCCAGTTCATCCCTGGCCCACG GGCTGATACGCGCCCACAGC
Product: phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVL EADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL THDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM GNADDAVKARANIVIGDNTTDSIAQFIYSYLI
Sequences:
>Translated_272_residues MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVL EADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL THDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM GNADDAVKARANIVIGDNTTDSIAQFIYSYLI >Mature_271_residues TTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLE ADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALT HDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMG NADDAVKARANIVIGDNTTDSIAQFIYSYLI
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates pyridoxalphosphate and erythrose 4-phosphate [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI1786982, Length=272, Percent_Identity=99.2647058823529, Blast_Score=563, Evalue=1e-162, Organism=Escherichia coli, GI48994981, Length=273, Percent_Identity=27.8388278388278, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787043, Length=276, Percent_Identity=23.5507246376812, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001757 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 - InterPro: IPR006380 [H]
Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]
EC number: NA
Molecular weight: Translated: 30229; Mature: 30097
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALD CCEEEEEEECCCEEECCHHHHCHHHHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHCC TPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGH CCCEEECCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCC VIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELG EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCC LECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM CEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCEEE GNADDAVKARANIVIGDNTTDSIAQFIYSYLI CCCCHHHHEEEEEEECCCCHHHHHHHHHHHHC >Mature Secondary Structure TTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALD CEEEEEEECCCEEECCHHHHCHHHHHHHHHHHHCCCEEEEEECCCEEEECHHHHHHHCC TPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGH CCCEEECCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCC VIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELG EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCC LECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM CEEEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHCCCCEEE GNADDAVKARANIVIGDNTTDSIAQFIYSYLI CCCCHHHHEEEEEEECCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7665460; 8564363; 8905232; 9278503 [H]