Click here to switch to the map view.

The map label for this gene is ibrA [H]

Identifier: 218688428

GI number: 218688428

Start: 623908

End: 625128

Strand: Reverse

Name: ibrA [H]

Synonym: ECED1_0601

Alternate gene names: 218688428

Gene position: 625128-623908 (Counterclockwise)

Preceding gene: 218688429

Following gene: 218688427

Centisome position: 12.0

GC content: 46.6

Gene sequence:

>1221_bases
ATGTCTATTTATAAAATCCCGCTTCCACTGAATATTCTGGAAGCTGCAAAAGAACGTATTACCTGGACACTTAATACCCT
ACCCCGTATCTGTGTTTCTTTTTCGGGTGGTAAAGATTCCGGATTAATGCTGCATCTGACAGCTGAAATTGCCCGACAAA
TGGGCAAAAAAATCTGCGTTTTGTTTATCGACTGGGAAGCGCAGTTCTCATGCACTATTAACTATGTTCAGTCATTACGT
GAGTTTTACGCCGATGTCATCGAAGAGTTTTACTGGGTTGCGCTCCCGCTTACGACGCAAAATTCCCTTTCTCAATACCA
ACCCGAATGGCAGTGCTGGGAACCTGATGTCGAATGGGTGCGTCAGCCCCCGCAAGATGCGATAACCGATCCTGACTTTT
TCTCCTTTTACCAGCCTGGTATGACCTTCGAACAATTTGTGCGTGAGTTTGCCGAATGGTTTTCGCAAAAGCGTCCGGCG
GCGATGATGATCGGCATCCGTGCAGATGAGTCCTACAACCGTTTTGTCGCCATCGCCAGTTTAAATAAACAACGTTTTGC
CGATGATAAGCCCTGGACCACCGCCGCACCAGGCGGTCATAGCTGGTACATTTACCCCATCTACGACTGGAAAGTGGCTG
ATATCTGGACCTGGTATGCTAACCATCAACAGCTCTGTAACCCACTGTATAATATAATGTATCAGGCAGGCGTCCCTCTG
CGTCATATGCGAATTTGCGAACCTTTTGGCCCGGAGCAACGGCAAGGATTATGGCTCTATCACGTTATCGAACCGGATCG
CTGGGCTGCTATGTGCGCACGAGTCAGCGGGGTAAAAAGTGGCGGCATTTACGCCGGACATGATAATCATTTTTATGGTC
ATCGGAAAATCCTCAAGCCAGAACATTTAGACTGGCAAGAATATGCATTATTGCTGCTCAATAGCATGCCGGAAAAAACG
GCTGAGCATTACCGCAATAAAATCGCTATTTATTTGCACTGGTATCAGAAAAAAGGCATCGAAGTTCCACAAACCCAGCA
AGGGGACATTGGCGCGAAAGATATCCCCTCCTGGCGGCGAATATGCAAAGTTTTACTCAATAACGATTACTGGTGCCGGG
CATTATCATTTAGTCCTACGAAAGCGAAGAACTATCAGCGTTATAACGAACGGATAAAAGGAAAACGTCAGGAATGGGGG
ATACTATGCAACAACGATTAA

Upstream 100 bases:

>100_bases
GTGTGAATATAAAATAATGTGCTCTATCTTGCTTCGTTTATCCTATAATTAGCGGATTCATCTCACGAGTCACCCCGTAA
CGTTCAGAGAGCGTTTTTAG

Downstream 100 bases:

>100_bases
CGCAGGATTTAACCCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAAAGCGATTAATGAAATCCGCATGGCGATC
CATCAGGTTAGCCCCTTTCG

Product: immunoglobulin-binding regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSIYKIPLPLNILEAAKERITWTLNTLPRICVSFSGGKDSGLMLHLTAEIARQMGKKICVLFIDWEAQFSCTINYVQSLR
EFYADVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPA
AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQQLCNPLYNIMYQAGVPL
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKT
AEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWG
ILCNND

Sequences:

>Translated_406_residues
MSIYKIPLPLNILEAAKERITWTLNTLPRICVSFSGGKDSGLMLHLTAEIARQMGKKICVLFIDWEAQFSCTINYVQSLR
EFYADVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPA
AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQQLCNPLYNIMYQAGVPL
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKT
AEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWG
ILCNND
>Mature_405_residues
SIYKIPLPLNILEAAKERITWTLNTLPRICVSFSGGKDSGLMLHLTAEIARQMGKKICVLFIDWEAQFSCTINYVQSLRE
FYADVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPAA
MMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQQLCNPLYNIMYQAGVPLR
HMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEKTA
EHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRRICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWGI
LCNND

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=406, Percent_Identity=97.7832512315271, Blast_Score=841, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 47826; Mature: 47695

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYKIPLPLNILEAAKERITWTLNTLPRICVSFSGGKDSGLMLHLTAEIARQMGKKICV
CCEEECCCCHHHHHHHHHHEEEEHHHHHHHHEEECCCCCCCEEEEEHHHHHHHCCCEEEE
LFIDWEAQFSCTINYVQSLREFYADVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWV
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCCCCCCCCHHHH
RQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPAAMMIGIRADESYNRFVAIAS
CCCCHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
LNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQQLCNPLYNIMYQAGVPL
CCHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEHEEEECCCHHHHHHHHHHHHHHCCCCH
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKP
HHHEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
EHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRR
CCCCHHHHHHHHHHCCCHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
ICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWGILCNND
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEECCC
>Mature Secondary Structure 
SIYKIPLPLNILEAAKERITWTLNTLPRICVSFSGGKDSGLMLHLTAEIARQMGKKICV
CEEECCCCHHHHHHHHHHEEEEHHHHHHHHEEECCCCCCCEEEEEHHHHHHHCCCEEEE
LFIDWEAQFSCTINYVQSLREFYADVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWV
EEEECCCEEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCCCCCCCCHHHH
RQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPAAMMIGIRADESYNRFVAIAS
CCCCHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
LNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQQLCNPLYNIMYQAGVPL
CCHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEHEEEECCCHHHHHHHHHHHHHHCCCCH
RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKP
HHHEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
EHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRR
CCCCHHHHHHHHHHCCCHHHHHHHHCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
ICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWGILCNND
HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]