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The map label for this gene is ybdF [H]

Identifier: 218688405

GI number: 218688405

Start: 595645

End: 596013

Strand: Reverse

Name: ybdF [H]

Synonym: ECED1_0571

Alternate gene names: 218688405

Gene position: 596013-595645 (Counterclockwise)

Preceding gene: 218688406

Following gene: 218688404

Centisome position: 11.44

GC content: 46.61

Gene sequence:

>369_bases
CTGCACGAAACGGCGAAACGCCTGGCTCTTGAGTTACCCTTTGTCGAGCTTTGCTGGCCTTTTGGCCCGGAGTTCGATGT
TTTTAAAATTGGCGGCAAGATTTTTATGCTGTCGTCGGAGCTGTGCGGCGTCCCCTTTATCAATCTGAAGTCCGATCCAC
AAAAATCTCTGTTAAATCAGCAAATATATCCGAGCATTAAGCCTGGGTATCACATGAACAAAAAACACTGGATTTCGGTG
TATCCCGGCGATGAAATCTCCGAAGCGTTACTTCACGATCTGATCAACGATTCATGGAATTTAGTGATCGATGGTCTGGC
GAAGCGCGATCAAAAACGACTGCGTCCTGACTCAACCGTAAATCAATAG

Upstream 100 bases:

>100_bases
TGGTTCTCGCTGGCGGATTAAACGTCGATTATCGCCGAACTTCGCGGCATACTTTGCTTATTCTCCTTCGCCTAAAGGAA
CATTTATGGATAAGCAATCA

Downstream 100 bases:

>100_bases
CGCATTTTTCTCGCTTACCATTTCATCTCGATCCTTGTAATCTGCTGGCACGCAAAATTACTTTCACATGGAGTCTTTAT
GGATATCATTTCTGTCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELCGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISV
YPGDEISEALLHDLINDSWNLVIDGLAKRDQKRLRPDSTVNQ

Sequences:

>Translated_122_residues
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELCGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISV
YPGDEISEALLHDLINDSWNLVIDGLAKRDQKRLRPDSTVNQ
>Mature_122_residues
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELCGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISV
YPGDEISEALLHDLINDSWNLVIDGLAKRDQKRLRPDSTVNQ

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786793, Length=116, Percent_Identity=94.8275862068966, Blast_Score=231, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 14008; Mature: 14008

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELCGVPFINLKSDPQKSLLNQ
CCCHHHHHHHCCCHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCEECCCCCHHHHHHHH
QIYPSIKPGYHMNKKHWISVYPGDEISEALLHDLINDSWNLVIDGLAKRDQKRLRPDSTV
HCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCCCCC
NQ
CC
>Mature Secondary Structure
MHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELCGVPFINLKSDPQKSLLNQ
CCCHHHHHHHCCCHHHHHCCCCCCCCEEEECCEEEEEECCCCCCCEECCCCCHHHHHHHH
QIYPSIKPGYHMNKKHWISVYPGDEISEALLHDLINDSWNLVIDGLAKRDQKRLRPDSTV
HCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCCCCC
NQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]