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The map label for this gene is ybbW [H]

Identifier: 218688369

GI number: 218688369

Start: 551824

End: 553185

Strand: Direct

Name: ybbW [H]

Synonym: ECED1_0530

Alternate gene names: 218688369

Gene position: 551824-553185 (Clockwise)

Preceding gene: 218688368

Following gene: 218688370

Centisome position: 10.59

GC content: 47.28

Gene sequence:

>1362_bases
ATGGAACATCAGAGAAAACTATTCCAGCAACGCGGCTATAGCGAAGATCTACTGCCGAAAACGCAAAGTCAGCGGACCTG
GAAAACATTTAACTATTTTACCTTATGGATGGGTTCGGTTCATAACGTTCCCAATTATGTGATGGTTGGCGGCTTTTTTA
TTCTCGGCTTGTCTACCTTTAGTATTATGCTGGCAATTATCCTCAGTGCCTTTTTCATTGCCGCGGTAATGGTATTAAAC
GGTGCTGCGGGCAGTAAATACAGCGTACCGTTTGCCATGATCCTGCGTGCTTCTTACGGCGTACGTGGTGCACTGTTTCC
CGGATTATTAAGAGGCGGTATTGCTGCCATTATGTGGTTTGGCCTGCAATGTTACGCGGGGTCACTGGCCTGCTTGATTC
TGATTGGCAAAATCTGGCCGGGATTTTTGACTCTCGGTGGCGATTTCACGCTGTTAGGCCTTTCTCTACCGGGATTAATT
ACTTTTTTACTCTTCTGGCTGGTTAACGTTGGTATTGGTTTTGGCGGCGGAAAAGTTTTAAATAAATTCACTGCCATTCT
TAACCCGTGCATCTATATCGTTTTCGGCGGTATGGCGATTTGGGCGATTTCGCTGGTCGGGATCGGTCCAATCTTTGACT
ACATTCCGGGCGGTATTCAGAAAGCAGAAAACAGTGGCTTCCTGTTTCTGGTGGTGATAAACGCGGTGGTTGCGGTCTGG
GCGGCACCGGCGGTGAGCGCATCCGACTTTACGCAAAACGCCCACTCGTTTCGTGAGCAGGCGCTGGGGCAAACGCTGGG
TTTAGTTGTGGCCTATATTCTGTTTGCGGTCGCCGGGGTATGTATTATTGCCGGAGCCAGTATTCATTACGGCGCTGACA
CCTGGAACGTGCTGGATATTGTTCAGCGTTGGGACAGCCTGTTCGCCTCGTTCTTTGTGGTACTGATTATTCTGATGACG
ACTATCTCTACTAACGCCACCGGTAATATTATTCCGGCTGGTTATCAGATTGCCGCCATTGCACCGACGAAACTGACCTA
TAAAAACGGCGTACTGATTGCCAGTATTATCAGCCTGCTGATCTGCCCGTGGAAATTAATGGAAAATCAGGACAGTATTT
ATCTGTTCCTCGATATTATCGGCGGAATGCTTGGTCCGGTAATTGGTGTGATGATGGCGCATTATTTTGTGGTGATGCGT
GGGCAAATTAATCTTGATGAACTGTACACCGCACCTGGCGATTATAAATATTACGATAACGGTTTTAACCTCACCGCGTT
TTCAGTAACTCTGGTGGCCGTTATTTTATCTCTTGGCGGTAAGTTTATTCCCTTTATGGAACCGTTATCACGTGTTTCAT
AG

Upstream 100 bases:

>100_bases
AAGATGTTGCTTCAGTATTAAAAATAATATTTTTATTTTATTTGTTCCTCATAGCTAGATTAAAACAACATTATTCGATA
CGTGAAATTAAGAGGGATTT

Downstream 100 bases:

>100_bases
TTTGTCGGCGTCATCGTCGCCTTTGCGGCCTACGCCTTATTAAAGAAACGTACAACAGCAGAAAAAACAGGAGAACAAAA
AACCATAGGTTAATTAATCA

Product: allantoin permease

Products: NA

Alternate protein names: Allantoin transport protein [H]

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLN
GAAGSKYSVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLI
TFLLFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPGGIQKAENSGFLFLVVINAVVAVW
AAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFVVLIILMT
TISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMR
GQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIPFMEPLSRVS

Sequences:

>Translated_453_residues
MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLN
GAAGSKYSVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLI
TFLLFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPGGIQKAENSGFLFLVVINAVVAVW
AAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFVVLIILMT
TISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMR
GQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIPFMEPLSRVS
>Mature_453_residues
MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLN
GAAGSKYSVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLI
TFLLFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPGGIQKAENSGFLFLVVINAVVAVW
AAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFVVLIILMT
TISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMR
GQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIPFMEPLSRVS

Specific function: Transport of allantoin [H]

COG id: COG1953

COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

Organism=Escherichia coli, GI87081749, Length=453, Percent_Identity=98.4547461368653, Blast_Score=893, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6322219, Length=445, Percent_Identity=24.9438202247191, Blast_Score=140, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6319495, Length=460, Percent_Identity=24.7826086956522, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6319429, Length=460, Percent_Identity=25.2173913043478, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6324766, Length=423, Percent_Identity=21.2765957446809, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323266, Length=431, Percent_Identity=20.8816705336427, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6324645, Length=422, Percent_Identity=18.7203791469194, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248
- InterPro:   IPR012681 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 49109; Mature: 49109

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]