Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is aroM [H]
Identifier: 218688253
GI number: 218688253
Start: 428396
End: 429073
Strand: Direct
Name: aroM [H]
Synonym: ECED1_0413
Alternate gene names: 218688253
Gene position: 428396-429073 (Clockwise)
Preceding gene: 218688252
Following gene: 218688254
Centisome position: 8.22
GC content: 46.46
Gene sequence:
>678_bases ATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACAGAATACATTGA CGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGCCGCGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAG GCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGTAAAGTGGAACGAGACCTGCAA GGTGTGGTTGAAGTGCTCGATAATCAGGGTTATGACGTCATTTTATTAATGAGTACAGCAAACATTAGTAGTATGACCGC GCGTAATACGATCTTTCTTGAGCCGTCGCGGATATTGCCACCGCTGGTTTCCTCTATTGTTGAAGATCATCAGGTGGGGG TTATCGTACCGGTTGAGGAGTTGCTGACCGTTCAGGCGCAAAAATGGCAAATTTTGCAGAAACCGCCAGTATTTTCATTG GGTAATCCCATTCATGATTCGGAACAAAAAATCATTGATGCCGGGAAAGAATTACTGGCAAAAGGTGCAGATGTCATCAT GCTGGATTGTTTGGGATTTAACCAGCGTCATCGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTCTCTAACG TATTGATTGCACGGCTGGCTGCGGAATTACTGATGTAA
Upstream 100 bases:
>100_bases TGCTACGCTTTTTGTCATTTGTAGCACAGGTAAGTGTCAGCAGTGGTGCTTAGCGCTTGCCCGGTAATTAACGACGAAAG AAAAGTAAGGTGGAAGAACA
Downstream 100 bases:
>100_bases TTTTGCGTGACAGTCAGCGCCTCTGGCCCCTATAGTGAAGTAGATGTTCAACTACCAGACAGGGCCAGTTTATGCTTCAA AGTAATGAGTACTTTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQ GVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEELLTVQAQKWQILQKPPVFSL GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFNQRHRDLLQKQLDVPVLLSNVLIARLAAELLM
Sequences:
>Translated_225_residues MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQ GVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEELLTVQAQKWQILQKPPVFSL GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFNQRHRDLLQKQLDVPVLLSNVLIARLAAELLM >Mature_224_residues SASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQG VVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEELLTVQAQKWQILQKPPVFSLG NPIHDSEQKIIDAGKELLAKGADVIMLDCLGFNQRHRDLLQKQLDVPVLLSNVLIARLAAELLM
Specific function: This protein of unknown function is encoded by a gene that cotranscribes with the aroL gene, which codes for shikimate kinase II [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786589, Length=225, Percent_Identity=97.7777777777778, Blast_Score=439, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010843 - ProDom: PD037589 [H]
Pfam domain/function: PF07302 AroM [H]
EC number: NA
Molecular weight: Translated: 24922; Mature: 24791
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILT CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILP EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCEEEECCHHHHH PLVSSIVEDHQVGVIVPVEELLTVQAQKWQILQKPPVFSLGNPIHDSEQKIIDAGKELLA HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH KGADVIMLDCLGFNQRHRDLLQKQLDVPVLLSNVLIARLAAELLM CCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILT CCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE LLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILP EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCEEEECCHHHHH PLVSSIVEDHQVGVIVPVEELLTVQAQKWQILQKPPVFSLGNPIHDSEQKIIDAGKELLA HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH KGADVIMLDCLGFNQRHRDLLQKQLDVPVLLSNVLIARLAAELLM CCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3001025; 9278503; 8807285 [H]