| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yejH [H]
Identifier: 218688140
GI number: 218688140
Start: 304239
End: 306629
Strand: Direct
Name: yejH [H]
Synonym: ECED1_0285
Alternate gene names: 218688140
Gene position: 304239-306629 (Clockwise)
Preceding gene: 218688139
Following gene: 218688142
Centisome position: 5.84
GC content: 48.01
Gene sequence:
>2391_bases GTGGATCGGATACAGGTAACGAATATGGTTCATAAATCTGACAGCGATGAATTAGCTGCATTGAGGGCAGAAAATGCCCG TCTGGTCTCATTACTTGAAGCTCATGGGATTGAATGGCGACGTAAACCGCCGATCTCTGTGCAGCGCGTTTCTGTATTAT CCACCAATGAGAAGGTTGCATTATTTCGTCGGTTGTTTCGTGGGCGTGATGATGTATGGGCCCTTCGATGGGAAAGTAAA ACCAGCGGCAAATCAGGGTATTCGCCTGCCTGCGCTAACGAATGGCAGTTGGGTATATGCGGTAAGCCCCGGATAAAATG TGGGGACTGCACTCACCGTCAGTTGATTCCTGTATCTGATCTCGTCATCTACCACCATCTGGCAGGTACCCATACTGCCG GGCTATATCCGTTGCTGGAAGATGATTCCTGTTATTTTCTGGCTGTTGATTTTGATGAAGCAGAATGGCAGAAGGATGCA TCCGCATTCATGCGATCCTGTGATGAGCTGGGTGTACCCGCTGCGCTGGAAATATCCCGTTCACGTCAGGGAGCGCATGT CTGGATATTTTTTTCCTCACGAGTTTCGGCCCACGAAGCTCGCCGTCTGGGGACTGCTGTTATTAGCTATACGTGTAGTC GGACCCGACAACTGCGATTGAGTTCTTATGACCGATTATTTCCTAACCAGGATACTATGCCAAAAGGGGGATTTGGTAAT CTTATCGCGTTACCTCTGCAAAAAAGACCGCGTGAATCGGGGGGCAGTGTTTTTGTTGATATGAATCTCCAGCCTTATCC TGATCAATGGGCTTTTCTTGCATCGGTGATCCCGATGAATGTGCAGGATATAGCACCGACGATATTACGGGCTACAGGGA GTATCCATCCTCTGGATGTGAGTTTTATCAACGAAGAAGACCTGGGTACGCCGTGGGAAGAGAAAAAATCATCAGGAAAC AGACTGAATATTTCTGTTGCTGAACCGCTGAAAATCACGGTGGCAAACCAGATCTATTTCGAAAAAGCGCAATTACCTCA GGTTCTGACTAACCGACTTATTCGGCTGGCAGCATTTCCGAACCCTGAGTTTTATAAAGCTCAGGCAATGCGTATGTCAG TCTGGAATAAGCCCCGTGTTACAGGTTGTGCGGAGAATTACCCGCAACATATTGCGTTGCCCCGGGGATGCCTGGACAGT GCTTTATCCTTCCTCAGGGACAACAATATTGCTGCAGAATTAATCGACAAACGATCTGTGGGCACAGAATGTAATGTGGC TTTCACCGGAAACCTCAGAGCGGAGCAGGAAGAGGCCGTTTCGTCATTACTCCGTTATGACACTGGTGTACTTTGTGCTC CAACGGCTTTTGGTAAGACAGTTACCGCGGCGGCAGTGATTGCCAGACGGAAAGTGAATACACTGATACTGGTACACCGG ACTGAATTGCTGAAGCAGTGGCAGGAGCGTCTCGCGGTGTTTCTGCAGGTCGGTGACAATATTGGTATTATCGGGGGAGG TAAACGTAAACCCTGTGGCAATATTGATATTGCGGTGATGCAGTCTATATCCAGATACGGAGAAGTTGAACCTCTGGTCA GGAATTATGGGCAAATCATTGTGGATGAGTGCCATCATATTGGTGCGGTTTCATTTTCTGCGATTCTGAAGGAAACGAAT GCCAGATATCTGCTTGGCCTGACGGCAACACCAATCCGACGGGATGGCCTGCACCCCATTATTTTTATGTACTGTGGTGC CATTCGCCATATAGTGGCCCGCCCGAAGGAAAACCCACATAATCTGGAGGTGCTGACCCGTTCCCGTTTTACATCTGGTC ATTTACCATCGGATGCGAGAATCCAGGATATTTTCAGAGAAATTGCTCTGGATCATGACAGAACGGTGGCGATAGCTGAA GAAGCCATGAAAGCTTTTGGGCAGGGGCGTAAAGTTCTGGTACTGACTGAACGTACAGAGCATCTGGATGCTATAGCATC AGTGATGAATTCACTGAAATTGTCTCCCTTTATTCTCCACGGTCGACTATCGAAAAAAAAGCGTGCGATGCTGATATCCG GACTGAATGCTCTTCCTCCTGATTCTCCTCGTATTTTGTTGTCAACCGGTAAACTTATAGGCGAAGGATTTGACCACCCT CCGCTGGATACGCTGATTCTTGCCATGCCTGTGTCATGGAAAGGGACGTTACAGCAGTATGCAGGGCGTCTTCACAGAGA GCATACAGGTAAAAGCGATGTCAGGATCATTGATTTTGTGGACACTGCGTATCCTGTGCTGCTCAGAATGTGGGATAAAC GTCAGCGGGGTTATAAAGCGATGGGGTACAGAATTATAGCTGAGGATGATGAACCAGCGTTTTCATTTTAA
Upstream 100 bases:
>100_bases TTTCTGTAAGTTGTTGGGAGGTGCTTGAGTTAATAGGCAGAAGAGGGCGGGGCGCTTTGTCATCAGTGTAGGGGACCCGA ATTTCTGCCGTGGTGCCTCA
Downstream 100 bases:
>100_bases GGAATACTTTACTCTTTTTAAATAATTTGAGCTCCCCGAGTTGTACGGGCAACAAAGAGCCCCAGTATACAGGCTTCCGG AATATGTTGTAGTATCAGGC
Product: putative helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MDRIQVTNMVHKSDSDELAALRAENARLVSLLEAHGIEWRRKPPISVQRVSVLSTNEKVALFRRLFRGRDDVWALRWESK TSGKSGYSPACANEWQLGICGKPRIKCGDCTHRQLIPVSDLVIYHHLAGTHTAGLYPLLEDDSCYFLAVDFDEAEWQKDA SAFMRSCDELGVPAALEISRSRQGAHVWIFFSSRVSAHEARRLGTAVISYTCSRTRQLRLSSYDRLFPNQDTMPKGGFGN LIALPLQKRPRESGGSVFVDMNLQPYPDQWAFLASVIPMNVQDIAPTILRATGSIHPLDVSFINEEDLGTPWEEKKSSGN RLNISVAEPLKITVANQIYFEKAQLPQVLTNRLIRLAAFPNPEFYKAQAMRMSVWNKPRVTGCAENYPQHIALPRGCLDS ALSFLRDNNIAAELIDKRSVGTECNVAFTGNLRAEQEEAVSSLLRYDTGVLCAPTAFGKTVTAAAVIARRKVNTLILVHR TELLKQWQERLAVFLQVGDNIGIIGGGKRKPCGNIDIAVMQSISRYGEVEPLVRNYGQIIVDECHHIGAVSFSAILKETN ARYLLGLTATPIRRDGLHPIIFMYCGAIRHIVARPKENPHNLEVLTRSRFTSGHLPSDARIQDIFREIALDHDRTVAIAE EAMKAFGQGRKVLVLTERTEHLDAIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRILLSTGKLIGEGFDHP PLDTLILAMPVSWKGTLQQYAGRLHREHTGKSDVRIIDFVDTAYPVLLRMWDKRQRGYKAMGYRIIAEDDEPAFSF
Sequences:
>Translated_796_residues MDRIQVTNMVHKSDSDELAALRAENARLVSLLEAHGIEWRRKPPISVQRVSVLSTNEKVALFRRLFRGRDDVWALRWESK TSGKSGYSPACANEWQLGICGKPRIKCGDCTHRQLIPVSDLVIYHHLAGTHTAGLYPLLEDDSCYFLAVDFDEAEWQKDA SAFMRSCDELGVPAALEISRSRQGAHVWIFFSSRVSAHEARRLGTAVISYTCSRTRQLRLSSYDRLFPNQDTMPKGGFGN LIALPLQKRPRESGGSVFVDMNLQPYPDQWAFLASVIPMNVQDIAPTILRATGSIHPLDVSFINEEDLGTPWEEKKSSGN RLNISVAEPLKITVANQIYFEKAQLPQVLTNRLIRLAAFPNPEFYKAQAMRMSVWNKPRVTGCAENYPQHIALPRGCLDS ALSFLRDNNIAAELIDKRSVGTECNVAFTGNLRAEQEEAVSSLLRYDTGVLCAPTAFGKTVTAAAVIARRKVNTLILVHR TELLKQWQERLAVFLQVGDNIGIIGGGKRKPCGNIDIAVMQSISRYGEVEPLVRNYGQIIVDECHHIGAVSFSAILKETN ARYLLGLTATPIRRDGLHPIIFMYCGAIRHIVARPKENPHNLEVLTRSRFTSGHLPSDARIQDIFREIALDHDRTVAIAE EAMKAFGQGRKVLVLTERTEHLDAIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRILLSTGKLIGEGFDHP PLDTLILAMPVSWKGTLQQYAGRLHREHTGKSDVRIIDFVDTAYPVLLRMWDKRQRGYKAMGYRIIAEDDEPAFSF >Mature_796_residues MDRIQVTNMVHKSDSDELAALRAENARLVSLLEAHGIEWRRKPPISVQRVSVLSTNEKVALFRRLFRGRDDVWALRWESK TSGKSGYSPACANEWQLGICGKPRIKCGDCTHRQLIPVSDLVIYHHLAGTHTAGLYPLLEDDSCYFLAVDFDEAEWQKDA SAFMRSCDELGVPAALEISRSRQGAHVWIFFSSRVSAHEARRLGTAVISYTCSRTRQLRLSSYDRLFPNQDTMPKGGFGN LIALPLQKRPRESGGSVFVDMNLQPYPDQWAFLASVIPMNVQDIAPTILRATGSIHPLDVSFINEEDLGTPWEEKKSSGN RLNISVAEPLKITVANQIYFEKAQLPQVLTNRLIRLAAFPNPEFYKAQAMRMSVWNKPRVTGCAENYPQHIALPRGCLDS ALSFLRDNNIAAELIDKRSVGTECNVAFTGNLRAEQEEAVSSLLRYDTGVLCAPTAFGKTVTAAAVIARRKVNTLILVHR TELLKQWQERLAVFLQVGDNIGIIGGGKRKPCGNIDIAVMQSISRYGEVEPLVRNYGQIIVDECHHIGAVSFSAILKETN ARYLLGLTATPIRRDGLHPIIFMYCGAIRHIVARPKENPHNLEVLTRSRFTSGHLPSDARIQDIFREIALDHDRTVAIAE EAMKAFGQGRKVLVLTERTEHLDAIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRILLSTGKLIGEGFDHP PLDTLILAMPVSWKGTLQQYAGRLHREHTGKSDVRIIDFVDTAYPVLLRMWDKRQRGYKAMGYRIIAEDDEPAFSF
Specific function: Unknown
COG id: COG4951
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788511, Length=367, Percent_Identity=25.8855585831063, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR006935 [H]
Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 89097; Mature: 89097
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS01108 RIBOSOMAL_L24
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRIQVTNMVHKSDSDELAALRAENARLVSLLEAHGIEWRRKPPISVQRVSVLSTNEKVA CCCEEEEHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHH LFRRLFRGRDDVWALRWESKTSGKSGYSPACANEWQLGICGKPRIKCGDCTHRQLIPVSD HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHH LVIYHHLAGTHTAGLYPLLEDDSCYFLAVDFDEAEWQKDASAFMRSCDELGVPAALEISR HHHHHHHCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECC SRQGAHVWIFFSSRVSAHEARRLGTAVISYTCSRTRQLRLSSYDRLFPNQDTMPKGGFGN CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LIALPLQKRPRESGGSVFVDMNLQPYPDQWAFLASVIPMNVQDIAPTILRATGSIHPLDV EEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEE SFINEEDLGTPWEEKKSSGNRLNISVAEPLKITVANQIYFEKAQLPQVLTNRLIRLAAFP EEECCCCCCCCHHHHHCCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHEEEEECC NPEFYKAQAMRMSVWNKPRVTGCAENYPQHIALPRGCLDSALSFLRDNNIAAELIDKRSV CCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCC GTECNVAFTGNLRAEQEEAVSSLLRYDTGVLCAPTAFGKTVTAAAVIARRKVNTLILVHR CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCEEEEEEH TELLKQWQERLAVFLQVGDNIGIIGGGKRKPCGNIDIAVMQSISRYGEVEPLVRNYGQII HHHHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHH VDECHHIGAVSFSAILKETNARYLLGLTATPIRRDGLHPIIFMYCGAIRHIVARPKENPH HHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC NLEVLTRSRFTSGHLPSDARIQDIFREIALDHDRTVAIAEEAMKAFGQGRKVLVLTERTE CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCHH HLDAIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRILLSTGKLIGEGFDHP HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCC PLDTLILAMPVSWKGTLQQYAGRLHREHTGKSDVRIIDFVDTAYPVLLRMWDKRQRGYKA CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHH MGYRIIAEDDEPAFSF HCEEEEECCCCCCCCC >Mature Secondary Structure MDRIQVTNMVHKSDSDELAALRAENARLVSLLEAHGIEWRRKPPISVQRVSVLSTNEKVA CCCEEEEHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHH LFRRLFRGRDDVWALRWESKTSGKSGYSPACANEWQLGICGKPRIKCGDCTHRQLIPVSD HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHH LVIYHHLAGTHTAGLYPLLEDDSCYFLAVDFDEAEWQKDASAFMRSCDELGVPAALEISR HHHHHHHCCCCCCCCCEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECC SRQGAHVWIFFSSRVSAHEARRLGTAVISYTCSRTRQLRLSSYDRLFPNQDTMPKGGFGN CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LIALPLQKRPRESGGSVFVDMNLQPYPDQWAFLASVIPMNVQDIAPTILRATGSIHPLDV EEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEE SFINEEDLGTPWEEKKSSGNRLNISVAEPLKITVANQIYFEKAQLPQVLTNRLIRLAAFP EEECCCCCCCCHHHHHCCCCEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHEEEEECC NPEFYKAQAMRMSVWNKPRVTGCAENYPQHIALPRGCLDSALSFLRDNNIAAELIDKRSV CCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCC GTECNVAFTGNLRAEQEEAVSSLLRYDTGVLCAPTAFGKTVTAAAVIARRKVNTLILVHR CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCCEEEEEEH TELLKQWQERLAVFLQVGDNIGIIGGGKRKPCGNIDIAVMQSISRYGEVEPLVRNYGQII HHHHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHH VDECHHIGAVSFSAILKETNARYLLGLTATPIRRDGLHPIIFMYCGAIRHIVARPKENPH HHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC NLEVLTRSRFTSGHLPSDARIQDIFREIALDHDRTVAIAEEAMKAFGQGRKVLVLTERTE CEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCHH HLDAIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRILLSTGKLIGEGFDHP HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCC PLDTLILAMPVSWKGTLQQYAGRLHREHTGKSDVRIIDFVDTAYPVLLRMWDKRQRGYKA CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHH MGYRIIAEDDEPAFSF HCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]