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The map label for this gene is ykfJ [H]

Identifier: 218688127

GI number: 218688127

Start: 287335

End: 288486

Strand: Direct

Name: ykfJ [H]

Synonym: ECED1_0269

Alternate gene names: 218688127

Gene position: 287335-288486 (Clockwise)

Preceding gene: 218688126

Following gene: 218688128

Centisome position: 5.52

GC content: 53.04

Gene sequence:

>1152_bases
ATGGAATGGTACATGGGCAAATATATTCGTCCCTTATCCGATGCGGTATTTACCATCGCATCTGATGACCTGTGGATCGA
AAGTTCAGCGATCCAACAATTACACACCACGGCAAATTTACCCAACATGCAGCGCGTTGTGGGGATGCCAGATTTACATC
CCGGACGCGGCTACCCGATTGGCGCAGCGTTCTTCTCTGTTGGTCGTTTTTACCCGGCACTGGTCGGCAATGATATCGGC
TGCGGCATGGCTCTATGGCAAACAGATATTCTCGCTCGCAAATACAACGCCGATAAGTTTGAAAAGCGATTATCAGATCT
GGATGACGTTGCTGAAGAAAGCTGGCTGGAGGAAAACCTGCCGTCAGCATTTGCACAGCATCCGTGGCGCAACTCGCTTG
GCTCCATCGGTGGCGGTAACCACTTCGCAGAACTGCAACAGATTGATCAAATTATCGACGCGGAACTGTTTGCACTGGCT
GGTCTGGATGCGCAGCATCTGCAACTGCTGGTTCATAGCGGCTCGAGGGGATTGGGGCAGCCTATTTTACAGCGGCATAT
TGCCTCGTTTTCGCATCATGGTTTGCCTGAAGGCAGTGACGACGCGCTACGGTATATTGCGGAACATGATGATGCGCTGG
CGTTTGCGCGTATTAATCGCCAGCTGATCGCTTTGCGCATAATGCAACAAGTTAAGGCCACCGGAAGTCCGGTTCTGGAT
GTGGCGCATAACTTTGTTAGCGCGTGCCAAATCGGCGATCAACAGGGCTGGTTGCATCGTAAAGGCGCCACGCCGGATGA
CAACGGTCTGGTGATTATTCCCGGTTCACGCGGCGATTACTCCTGGCTGGTTAAACCTGTTGCGAACGAAAAAACGCTCC
ACTCGCTGGCGCATGGGGCGGGGCGTAAATGGGGGCGCACCGAGTGTAAAGGGCGTCTGGCAGCGAAATACACGGCGACG
CAACTCTCGCGGACTGAACTTGGCAGTCGGGTAATTTGTCGCGATAAACAACTCATCTTTGAAGAAGCGCCACAAGCCTA
TAAATCGGCTGAAAGCGTGGTGCAATGTCTGGTGCTGGCTGGGTTAATTATTCCTGTCGCGCGACTGCGCCCGGTGCTGA
CGCTCAAAAACAGTGGAGGGAAAAAAGGATGA

Upstream 100 bases:

>100_bases
ATGACAAATCCTTTATCAATGACTCTTTGCAGACCTTTCCAGGATTAATTCTTTTTTCTTGCCCTGGATTCGTCTGCCAT
TTCCTGATTTTTATTCATAA

Downstream 100 bases:

>100_bases
TCTTGCTACAACTCTCCTCTGCTCAGGGGCCGGAAGAATGTTGTCTCGCAGTGAAAAAAGCACTGGACAGGCTGATTAAA
GAAGCTACCCGACAGGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MEWYMGKYIRPLSDAVFTIASDDLWIESSAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALVGNDIG
CGMALWQTDILARKYNADKFEKRLSDLDDVAEESWLEENLPSAFAQHPWRNSLGSIGGGNHFAELQQIDQIIDAELFALA
GLDAQHLQLLVHSGSRGLGQPILQRHIASFSHHGLPEGSDDALRYIAEHDDALAFARINRQLIALRIMQQVKATGSPVLD
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGAGRKWGRTECKGRLAAKYTAT
QLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVLAGLIIPVARLRPVLTLKNSGGKKG

Sequences:

>Translated_383_residues
MEWYMGKYIRPLSDAVFTIASDDLWIESSAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALVGNDIG
CGMALWQTDILARKYNADKFEKRLSDLDDVAEESWLEENLPSAFAQHPWRNSLGSIGGGNHFAELQQIDQIIDAELFALA
GLDAQHLQLLVHSGSRGLGQPILQRHIASFSHHGLPEGSDDALRYIAEHDDALAFARINRQLIALRIMQQVKATGSPVLD
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGAGRKWGRTECKGRLAAKYTAT
QLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVLAGLIIPVARLRPVLTLKNSGGKKG
>Mature_383_residues
MEWYMGKYIRPLSDAVFTIASDDLWIESSAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPALVGNDIG
CGMALWQTDILARKYNADKFEKRLSDLDDVAEESWLEENLPSAFAQHPWRNSLGSIGGGNHFAELQQIDQIIDAELFALA
GLDAQHLQLLVHSGSRGLGQPILQRHIASFSHHGLPEGSDDALRYIAEHDDALAFARINRQLIALRIMQQVKATGSPVLD
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGAGRKWGRTECKGRLAAKYTAT
QLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVLAGLIIPVARLRPVLTLKNSGGKKG

Specific function: Unknown

COG id: COG1690

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7657015, Length=446, Percent_Identity=25.5605381165919, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI2367224, Length=419, Percent_Identity=27.2076372315036, Blast_Score=120, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17506665, Length=444, Percent_Identity=25.9009009009009, Blast_Score=110, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001233 [H]

Pfam domain/function: PF01139 UPF0027 [H]

EC number: NA

Molecular weight: Translated: 42084; Mature: 42084

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWYMGKYIRPLSDAVFTIASDDLWIESSAIQQLHTTANLPNMQRVVGMPDLHPGRGYPI
CCCCHHHHHHHHHHHHEEEECCCCEECHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCH
GAAFFSVGRFYPALVGNDIGCGMALWQTDILARKYNADKFEKRLSDLDDVAEESWLEENL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PSAFAQHPWRNSLGSIGGGNHFAELQQIDQIIDAELFALAGLDAQHLQLLVHSGSRGLGQ
HHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCH
PILQRHIASFSHHGLPEGSDDALRYIAEHDDALAFARINRQLIALRIMQQVKATGSPVLD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGA
HHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHC
GRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVLA
CCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCHHHHHHHHHHHHHHHHH
GLIIPVARLRPVLTLKNSGGKKG
HHHHHHHHHCCEEEEECCCCCCC
>Mature Secondary Structure
MEWYMGKYIRPLSDAVFTIASDDLWIESSAIQQLHTTANLPNMQRVVGMPDLHPGRGYPI
CCCCHHHHHHHHHHHHEEEECCCCEECHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCH
GAAFFSVGRFYPALVGNDIGCGMALWQTDILARKYNADKFEKRLSDLDDVAEESWLEENL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PSAFAQHPWRNSLGSIGGGNHFAELQQIDQIIDAELFALAGLDAQHLQLLVHSGSRGLGQ
HHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCH
PILQRHIASFSHHGLPEGSDDALRYIAEHDDALAFARINRQLIALRIMQQVKATGSPVLD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWLVKPVANEKTLHSLAHGA
HHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHC
GRKWGRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVLA
CCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCHHHHHHHHHHHHHHHHH
GLIIPVARLRPVLTLKNSGGKKG
HHHHHHHHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]