Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is yafP [H]
Identifier: 218688126
GI number: 218688126
Start: 286705
End: 287157
Strand: Direct
Name: yafP [H]
Synonym: ECED1_0268
Alternate gene names: 218688126
Gene position: 286705-287157 (Clockwise)
Preceding gene: 218688125
Following gene: 218688127
Centisome position: 5.5
GC content: 43.93
Gene sequence:
>453_bases ATGAATAACATACAAATAAGAAACTATCAGCCTGGTGATTTTCAGCAACTATGCGCTATTTTCCTTCGAGCTGTTACGAT GACGGCGAGTCAGCACTATTCTCCACAGCAAATTGCCGCCTGGGCGCAGATTGACGAATCTCGCTGGAAGGAGAAACTCG CGAAATCACAAGTGCGGGTTGCAGTTATTAATGCACAACCGGTTGGTTTTATTACCTGCATTGGACATTATATCGATATG TTATTTGTTGAACCGGAATACACCCGACGCGGGGTTGCCAGCGCTTTGTTAAAACCATTGATTAAGTCTGAATCCGAACT TACGGTGGACGCCAGCATAACCGCAAAACCCTTTTTTGAACGTTATGGTTTTCAGACAGTTAAGCAGCAGCGCGTTGAAT GCCGGGGAACGTGGTTTACTAATTTTTATATGCGATATAAACCGCAACATTAA
Upstream 100 bases:
>100_bases TCTGAAACCTGAACCTCATAAACTGGCTCGAGATAACAACCAAATGCATAAAATTGGGAAAATGGCAGAAGCGTTTCGCA TGCGTTTTTGAATTTATATT
Downstream 100 bases:
>100_bases ATCCAGCTTGCAATGAAAATAACGCCCGTCTAGTATGTGCGCGTTTTCTTATTCCACAAACTGCAAGGAGGTAAATCATG ACAAATCCTTTATCAATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MNNIQIRNYQPGDFQQLCAIFLRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIGHYIDM LFVEPEYTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGTWFTNFYMRYKPQH
Sequences:
>Translated_150_residues MNNIQIRNYQPGDFQQLCAIFLRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIGHYIDM LFVEPEYTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGTWFTNFYMRYKPQH >Mature_150_residues MNNIQIRNYQPGDFQQLCAIFLRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIGHYIDM LFVEPEYTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGTWFTNFYMRYKPQH
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1786428, Length=150, Percent_Identity=94, Blast_Score=298, Evalue=8e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 17428; Mature: 17428
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIQIRNYQPGDFQQLCAIFLRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRV CCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE AVINAQPVGFITCIGHYIDMLFVEPEYTRRGVASALLKPLIKSESELTVDASITAKPFFE EEECCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHH RYGFQTVKQQRVECRGTWFTNFYMRYKPQH HHCHHHHHHHHHHHCCCEEEEEEEEECCCC >Mature Secondary Structure MNNIQIRNYQPGDFQQLCAIFLRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRV CCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEE AVINAQPVGFITCIGHYIDMLFVEPEYTRRGVASALLKPLIKSESELTVDASITAKPFFE EEECCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHH RYGFQTVKQQRVECRGTWFTNFYMRYKPQH HHCHHHHHHHHHHHCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7596361; 9278503 [H]