Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yaeT [H]
Identifier: 218688052
GI number: 218688052
Start: 202703
End: 205135
Strand: Direct
Name: yaeT [H]
Synonym: ECED1_0183
Alternate gene names: 218688052
Gene position: 202703-205135 (Clockwise)
Preceding gene: 218688051
Following gene: 218688053
Centisome position: 3.89
GC content: 50.27
Gene sequence:
>2433_bases ATGGCGATGAAAAAGTTGCTCATAGCGTCGCTGCTGTTTAGCAGCGCCACCGTATACGGTGCTGAAGGGTTCGTAGTGAA AGATATTCATTTCGAAGGCCTTCAGCGTGTCGCCGTTGGTGCGGCCCTCCTCAGTATGCCGGTGCGCACAGGCGACGCGG TTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGAT GGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGA TGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCATTGCCGATATCG AGAAAGGTCTGGAAGACTTCTACTACAGCGTCGGTAAATATAGCGCCAGCGTTAAAGCTGTCGTGACCCCGCTGCCGCGC AACCGTGTTGACCTAAAACTGGTGTTCCAGGAAGGTGTGTCAGCTGAAATCCAGCAAATTAACATTGTTGGTAACCATGC TTTCACCACCGATGAACTGATCTCTCATTTCCAACTGCGTGACGAAGTGCCGTGGTGGAACGTGGTAGGCGATCGTAAAT ACCAGAAACAGAAACTGGCGGGCGACCTTGAAACCCTGCGCAGTTACTATCTGGATCGCGGTTATGCCCGTTTCAACATC GATTCTACCCAGGTCAGTCTGACGCCAGATAAAAAAGGTATTTACGTCACGGTGAACATCACCGAAGGCGATCAGTACAA GCTTTCTGGCGTTGAAGTTAGCGGCAATCTTGCCGGGCACTCCGCTGAAATTGAGCAACTGACTAAGATCGAGCCGGGCG AGCTGTATAACGGCACCAAAGTGACCAAAATGGAAGATGACATTAAAAAGCTTCTTGGTCGCTATGGTTATGCCTATCCG CGCGTACAGTCGATGCCTGAAATTAACGATGCCGACAAAACCGTTAAATTACGCGTGAACGTTGATGCGGGTAACCGTTT CTATGTGCGTAAGATCCGTTTTGAAGGTAACGATACCTCGAAAGATGCTGTCCTGCGTCGCGAAATGCGTCAGATGGAAG GTGCATGGCTGGGGAGCGATCTGGTCGATCAGGGTAAGGAGCGTCTGAACCGTCTGGGCTTCTTTGAAACTGTCGATACC GATACCCAACGTGTTCCGGGGAGCCCGGATCAGGTTGATGTAGTTTACAAGGTGAAAGAACGTAACACCGGTAGCTTCAA CTTCGGGATTGGTTACGGTACTGAAAGTGGCGTGAGCTTCCAGGCTGGTGTGCAACAGGATAACTGGTTAGGTACGGGTT ATGCTGTTGGTATCAACGGGACCAAAAACGATTACCAGACCTATGCTGAACTGTCGGTAACCAACCCGTACTTCACCGTA GATGGCGTAAGCCTCGGTGGTCGTCTCTTCTATAATGACTTCCAGGCAGATGACGCCGACCTGTCCGACTATACCAACAA GAGTTATGGTACAGACGTGACGTTGGGCTTCCCGATCAACGAATATAACTCGCTGCGTGCAGGTCTGGGTTATGTACATA ACTCCCTGTCCAACATGCAGCCGCAGGTTGCGATGTGGCGTTATCTGTACTCTATGGGTGAACATCCGAGCACCTCTGAT CAGGATAACAGCTTCAAAACGGACGACTTCACGTTCAACTATGGTTGGACCTATAACAAGCTTGACCGTGGTTACTTCCC GACAGATGGTTCACGTGTCAACCTGACCGGTAAAGTGACCATTCCGGGATCGGATAACGAATACTACAAAGTGACGTTAG ACACGGCGACTTATGTGCCGATTGATGACGATCACAAATGGGTTGTTCTGGGTCGTACCCGCTGGGGTTATGGTGATGGT TTAGGCGGCAAAGAGATGCCGTTCTATGAGAACTTCTATGCCGGTGGTTCCAGCACCGTGCGTGGCTTCCAGTCCAATAC CATTGGTCCGAAAGCAGTTTACTTCCCGCATCAGGCCAGTAATTATGATCCGGACTATGATTACGAATGTGCGACTCAGG ACGGCGCGAAAGATCTGTGTAAATCGGATGATGCTGTAGGCGGTAACGCCATGGCGGTTGCCAGCCTCGAGTTCATCACC CCGACGCCGTTTATTAGCGATAAGTATGCTAACTCGGTTCGTACTTCCTTCTTCTGGGATATGGGTACCGTTTGGGATAC AAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCAT TACAATGGATGTCCCCATTGGGGCCGTTGGTGTTCTCCTACGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAA CAGTTCCAGTTTAACATCGGTAAAACCTGGTAA
Upstream 100 bases:
>100_bases ATCGCATTGGCTCGATTCTGCTGGTGCTGTTAATGGGGCTTGCACTTTTCAATGATTTCTCTCGGTTATGAGAGTTAGTT AGGAAGAACGCATAATAACG
Downstream 100 bases:
>100_bases GTGTTCTCCACAAAGGAATGTAGTGGTAGTGTAGCGATGACTTTAGGCGATCAATATAAGATCGCCGGGCCACGCAAAGA ACTGCACCCTCCGGTGCAAA
Product: outer membrane protein assembly factor YaeT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 810; Mature: 809
Protein sequence:
>810_residues MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDAVNDEDISNTIRALFATGNFEDVRVLRD GDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYP RVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDT DTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSD QDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDG LGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAE QFQFNIGKTW
Sequences:
>Translated_810_residues MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDAVNDEDISNTIRALFATGNFEDVRVLRD GDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYP RVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDT DTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSD QDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDG LGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAE QFQFNIGKTW >Mature_809_residues AMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDAVNDEDISNTIRALFATGNFEDVRVLRDG DTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRN RVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNID STQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPR VQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTD TQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVD GVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQ DNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGL GGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITP TPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQ FQFNIGKTW
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=810, Percent_Identity=99.8765432098765, Blast_Score=1663, Evalue=0.0,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 90523; Mature: 90392
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDAVNDEDIS CCHHHHHHHHHHHHCCEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR HHHHHEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCEE VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQI ECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEE NIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI EEEECCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTK CCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCE VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS EEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC KDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEEC RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV CCCCCEEEEEECCCCCCCEEEECCCCCCEECCCEEEECCCCCCCCCEEEEEEECCCEEEE DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQ ECCCCCCEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC PQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVT HHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCEECCCCCCCCCCCCCEEEEEEEEE IPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTV ECCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCHHC RGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT CCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCEEEEEEEEEEC PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPL CCCCCCCHHHHHHHHHEEEECCCEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCHH GPLVFSYAQPFKKYDGDKAEQFQFNIGKTW HHHHHHHHHHHHHCCCCCCCEEEEECCCCC >Mature Secondary Structure AMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDAVNDEDIS CHHHHHHHHHHHHCCEEECCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR HHHHHEEECCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCEE VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQI ECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEE NIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI EEEECCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTK CCCEEEECCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCE VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS EEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCC KDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEEC RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV CCCCCEEEEEECCCCCCCEEEECCCCCCEECCCEEEECCCCCCCCCEEEEEEECCCEEEE DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQ ECCCCCCEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC PQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVT HHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEECCCEECCCCCCCCCCCCCEEEEEEEEE IPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTV ECCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCHHC RGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT CCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCEEEEEEEEEEC PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPL CCCCCCCHHHHHHHHHEEEECCCEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCHH GPLVFSYAQPFKKYDGDKAEQFQFNIGKTW HHHHHHHHHHHHHCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA