Definition | Escherichia coli ED1a chromosome, complete genome. |
---|---|
Accession | NC_011745 |
Length | 5,209,548 |
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The map label for this gene is yhhZ [H]
Identifier: 218687987
GI number: 218687987
Start: 124261
End: 126042
Strand: Direct
Name: yhhZ [H]
Synonym: ECED1_0111
Alternate gene names: 218687987
Gene position: 124261-126042 (Clockwise)
Preceding gene: 218687985
Following gene: 218687988
Centisome position: 2.39
GC content: 48.48
Gene sequence:
>1782_bases GTGGGCGATATTGTTTACCTGAGAATAATCGGTGAGAAGCAGGGCGATATTTCTTCAGGCTGTGGGACGTATGCGTCGGT TGGTAATCGCTGGCAGGTTGGCCATGAAGATGAAATTTTTGCCTTTGCACTCACCAACGCCATTACCAGTACTGGTAAAG GCGTTAATCTACAGGGGCTACAATTTTGCAAACTCATTGATAAAAGCTCACCGCTACTGTCTAATGCCATCAATCAGAAT GAGCGGTTATTTATTGAAATCGATTTGTATCGTATAAATAAAAGCAGGCACTGGGAACGGTATTATTATATTCAGCTAAG AAATGCTTCATTAACTGCTATTCATGTAAACATTTCTGACAATAATCTTCCTACCGAATGTGTAAATGTTAATTATGACT ACATATTATGCAAACATCTCATAGCCAATACGGAATTTGACTGGTTGGCCTTTCCTGCTGGCTATAATAGCTTATTTATT CCACCTAAAAACCCACCTGCCAGTAATCTTAACCCTGAGCCGCTACCAGTTGTTAACCTTCCACTCTCTCCACCAGCGGT TAAACCGGTCTATGCCAAATCCTGTCTGAAGGAGAAGGGATGTACAGATGCCGGAACGGCAGAAGAACCCGCTGAAAACT TCGGGCAAGTAGCGATTTTTGCTCTGCCAGTGGTTGATGACTGCTGTGGATACCACCATCCGGAGGCTAACGATGTTGGG CAACCCGCAGAAGCTCAAACCATGCTACTGTTTCCGGGTAGTGTGTTGGCGGCTCAAATATGGGGAAAATGGTCGCTCAG TGGCATACTCAGTGCAACCTGCGGCTCTTACATCGGTGCGTTGGCATCTGCTTTGTATATTCCCTCTGCGGGCGAGGGCA GTGCTCGCGTGCCCGGACGTGATGAGTTCTGGTATGAGGAAGAACTGCGGCAGAAAGCACTAGCAGGCAGTACCGCCACC ACCCGGGTACGTTTTTTCTGGGGAACTGACATTCACGGCAAGCCTCAGGTGTATGGTGTTCATACGGGTGAAGGTACGCC GTATGAAAACGTCCGCGTGGCGAACATGCAGTGGAACGAGCAGACGCAGCGTTATGAATTTACCCCCGCTCACGATGTCG ATGGCCCCCTGATTACCTGGACGCCGGAAAATCCGGAACATGGGTATGTTCCGGGCCATACCGGTAACGACAGGCCGCCG CTGGATCAGCCCACCATTCTGGTGACGCCGATTCCGGACGGTACAGATACCTATACCACGCCGCCATTCCCGGTTCCTGA TCCGAAAGAATTCAACGATTGTATTCTGGTTTTTCCGGCGGGATCCGGTATTAAGCCTATCTATGTTTACCTGAAGGAGG ATCCGCGAAAGCTGCCTGGTGTTGTAACAGGGCGCGGCGTCCTGCTTTCACCAGGAACTCGCTGGCTGGATATGTCGGTA TCCAATAACGGCAACGGCGCACCAATCCAGGCGCATATTGCTGATAAATTGCGCGGACGGGAGTTTAAAACCTTTGATGA GTTTCGCGAGGCGCTGTGGCTGGAGGTGAGTCAGGATCCGGAGTTGATAGCGCAGTTTTCAAGTGGTAACCAAACACGTA TAAAACAAGGATTAACCGCAAAAGCACCTATTGACGGTTGGTATTATGGCCCTAAAGAAATAGTTAAAAAATTCCAGATA CATCATCGTGTTGCAGTTGAATATGGCGGCAGCGTATACGATATTGATAATTTACGAATTGTTACCCCCAGACTACACGA TGAGATTCACTACAGGAGATAA
Upstream 100 bases:
>100_bases GTAATTGAAATAATTTTTCATTAAAAGCGTTTCTTATTGATCGAGAAATAAGTTTTCTATTTAATGCAAAAAAGTTAAGG ATAAACGGGAATGAAATAAA
Downstream 100 bases:
>100_bases ATATGTTTAAAGAAAAGCTCCAGGATTATACCGAGGATGAATTTCTTAATTTTTTAGGCGGATTGAGATCATCTATGAAA GATGGAAAATCCTTAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MGDIVYLRIIGEKQGDISSGCGTYASVGNRWQVGHEDEIFAFALTNAITSTGKGVNLQGLQFCKLIDKSSPLLSNAINQN ERLFIEIDLYRINKSRHWERYYYIQLRNASLTAIHVNISDNNLPTECVNVNYDYILCKHLIANTEFDWLAFPAGYNSLFI PPKNPPASNLNPEPLPVVNLPLSPPAVKPVYAKSCLKEKGCTDAGTAEEPAENFGQVAIFALPVVDDCCGYHHPEANDVG QPAEAQTMLLFPGSVLAAQIWGKWSLSGILSATCGSYIGALASALYIPSAGEGSARVPGRDEFWYEEELRQKALAGSTAT TRVRFFWGTDIHGKPQVYGVHTGEGTPYENVRVANMQWNEQTQRYEFTPAHDVDGPLITWTPENPEHGYVPGHTGNDRPP LDQPTILVTPIPDGTDTYTTPPFPVPDPKEFNDCILVFPAGSGIKPIYVYLKEDPRKLPGVVTGRGVLLSPGTRWLDMSV SNNGNGAPIQAHIADKLRGREFKTFDEFREALWLEVSQDPELIAQFSSGNQTRIKQGLTAKAPIDGWYYGPKEIVKKFQI HHRVAVEYGGSVYDIDNLRIVTPRLHDEIHYRR
Sequences:
>Translated_593_residues MGDIVYLRIIGEKQGDISSGCGTYASVGNRWQVGHEDEIFAFALTNAITSTGKGVNLQGLQFCKLIDKSSPLLSNAINQN ERLFIEIDLYRINKSRHWERYYYIQLRNASLTAIHVNISDNNLPTECVNVNYDYILCKHLIANTEFDWLAFPAGYNSLFI PPKNPPASNLNPEPLPVVNLPLSPPAVKPVYAKSCLKEKGCTDAGTAEEPAENFGQVAIFALPVVDDCCGYHHPEANDVG QPAEAQTMLLFPGSVLAAQIWGKWSLSGILSATCGSYIGALASALYIPSAGEGSARVPGRDEFWYEEELRQKALAGSTAT TRVRFFWGTDIHGKPQVYGVHTGEGTPYENVRVANMQWNEQTQRYEFTPAHDVDGPLITWTPENPEHGYVPGHTGNDRPP LDQPTILVTPIPDGTDTYTTPPFPVPDPKEFNDCILVFPAGSGIKPIYVYLKEDPRKLPGVVTGRGVLLSPGTRWLDMSV SNNGNGAPIQAHIADKLRGREFKTFDEFREALWLEVSQDPELIAQFSSGNQTRIKQGLTAKAPIDGWYYGPKEIVKKFQI HHRVAVEYGGSVYDIDNLRIVTPRLHDEIHYRR >Mature_592_residues GDIVYLRIIGEKQGDISSGCGTYASVGNRWQVGHEDEIFAFALTNAITSTGKGVNLQGLQFCKLIDKSSPLLSNAINQNE RLFIEIDLYRINKSRHWERYYYIQLRNASLTAIHVNISDNNLPTECVNVNYDYILCKHLIANTEFDWLAFPAGYNSLFIP PKNPPASNLNPEPLPVVNLPLSPPAVKPVYAKSCLKEKGCTDAGTAEEPAENFGQVAIFALPVVDDCCGYHHPEANDVGQ PAEAQTMLLFPGSVLAAQIWGKWSLSGILSATCGSYIGALASALYIPSAGEGSARVPGRDEFWYEEELRQKALAGSTATT RVRFFWGTDIHGKPQVYGVHTGEGTPYENVRVANMQWNEQTQRYEFTPAHDVDGPLITWTPENPEHGYVPGHTGNDRPPL DQPTILVTPIPDGTDTYTTPPFPVPDPKEFNDCILVFPAGSGIKPIYVYLKEDPRKLPGVVTGRGVLLSPGTRWLDMSVS NNGNGAPIQAHIADKLRGREFKTFDEFREALWLEVSQDPELIAQFSSGNQTRIKQGLTAKAPIDGWYYGPKEIVKKFQIH HRVAVEYGGSVYDIDNLRIVTPRLHDEIHYRR
Specific function: Unknown
COG id: COG3157
COG function: function code S; Hemolysin-coregulated protein (uncharacterized)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hcp1 family [H]
Homologues:
Organism=Escherichia coli, GI1789850, Length=169, Percent_Identity=57.396449704142, Blast_Score=213, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017728 - InterPro: IPR008514 [H]
Pfam domain/function: PF05638 DUF796 [H]
EC number: NA
Molecular weight: Translated: 65798; Mature: 65667
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIVYLRIIGEKQGDISSGCGTYASVGNRWQVGHEDEIFAFALTNAITSTGKGVNLQGL CCCEEEEEEECCCCCCCCCCCCCHHHCCCEECCCCCCCEEEEEEHHHHHCCCCCCCCCHH QFCKLIDKSSPLLSNAINQNERLFIEIDLYRINKSRHWERYYYIQLRNASLTAIHVNISD HHHHHHCCCCCHHHHHCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCEEEEEEEEECC NNLPTECVNVNYDYILCKHLIANTEFDWLAFPAGYNSLFIPPKNPPASNLNPEPLPVVNL CCCCCEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEC PLSPPAVKPVYAKSCLKEKGCTDAGTAEEPAENFGQVAIFALPVVDDCCGYHHPEANDVG CCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEEEHHHHHHCCCCCCCCCCC QPAEAQTMLLFPGSVLAAQIWGKWSLSGILSATCGSYIGALASALYIPSAGEGSARVPGR CCCCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DEFWYEEELRQKALAGSTATTRVRFFWGTDIHGKPQVYGVHTGEGTPYENVRVANMQWNE CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCC QTQRYEFTPAHDVDGPLITWTPENPEHGYVPGHTGNDRPPLDQPTILVTPIPDGTDTYTT CCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC PPFPVPDPKEFNDCILVFPAGSGIKPIYVYLKEDPRKLPGVVTGRGVLLSPGTRWLDMSV CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEECCEEEECCCCEEEEEEE SNNGNGAPIQAHIADKLRGREFKTFDEFREALWLEVSQDPELIAQFSSGNQTRIKQGLTA CCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHEEEEECCCHHHEEEECCCCHHHHHCCCEE KAPIDGWYYGPKEIVKKFQIHHRVAVEYGGSVYDIDNLRIVTPRLHDEIHYRR CCCCCCEEECHHHHHHHHHHHHEEEEEECCEEEEECCEEEECCHHHCCCCCCC >Mature Secondary Structure GDIVYLRIIGEKQGDISSGCGTYASVGNRWQVGHEDEIFAFALTNAITSTGKGVNLQGL CCEEEEEEECCCCCCCCCCCCCHHHCCCEECCCCCCCEEEEEEHHHHHCCCCCCCCCHH QFCKLIDKSSPLLSNAINQNERLFIEIDLYRINKSRHWERYYYIQLRNASLTAIHVNISD HHHHHHCCCCCHHHHHCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCEEEEEEEEECC NNLPTECVNVNYDYILCKHLIANTEFDWLAFPAGYNSLFIPPKNPPASNLNPEPLPVVNL CCCCCEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEC PLSPPAVKPVYAKSCLKEKGCTDAGTAEEPAENFGQVAIFALPVVDDCCGYHHPEANDVG CCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEEEHHHHHHCCCCCCCCCCC QPAEAQTMLLFPGSVLAAQIWGKWSLSGILSATCGSYIGALASALYIPSAGEGSARVPGR CCCCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DEFWYEEELRQKALAGSTATTRVRFFWGTDIHGKPQVYGVHTGEGTPYENVRVANMQWNE CCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCC QTQRYEFTPAHDVDGPLITWTPENPEHGYVPGHTGNDRPPLDQPTILVTPIPDGTDTYTT CCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC PPFPVPDPKEFNDCILVFPAGSGIKPIYVYLKEDPRKLPGVVTGRGVLLSPGTRWLDMSV CCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCEEECCEEEECCCCEEEEEEE SNNGNGAPIQAHIADKLRGREFKTFDEFREALWLEVSQDPELIAQFSSGNQTRIKQGLTA CCCCCCCEEEEEEHHHHCCCCCCHHHHHHHHEEEEECCCHHHEEEECCCCHHHHHCCCEE KAPIDGWYYGPKEIVKKFQIHHRVAVEYGGSVYDIDNLRIVTPRLHDEIHYRR CCCCCCEEECHHHHHHHHHHHHEEEEEECCEEEEECCEEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]