Definition | Escherichia coli S88, complete genome. |
---|---|
Accession | NC_011742 |
Length | 5,032,268 |
Click here to switch to the map view.
The map label for this gene is yhbU
Identifier: 218560230
GI number:
Start: 3509012
End: 3510007
Strand: Direct
Name: yhbU
Synonym: ECS88_3542
Alternate gene names: NA
Gene position: NA
Preceding gene: 218560227
Following gene: 218560231
Centisome position: NA
GC content: NA
Gene sequence:
>996_bases ATGGAGCTGCTCTGCCCTGCCGGAAATCTCCCGGCGCTTAAGGCGGCCATCGAAAACGGCGCAGATGCTGTTTATATCGG GCTAAAAGATGATACCAATGCCCGTCACTTCGCCGGCCTTAACTTTACCGAGAAAAAATTGCAGGAAGCGGTGAGTTTTG TCCATCAACATCGCCGCAAACTTCACATCGCGATTAACACTTTTGCGCATCCGGACGGTTACGCCCGTTGGCAGCGCGCC GTGGATATGGCGGCGCAACTGGGTGCCGACGCGCTGATACTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTA TCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTG ACGTTGCCCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGAAACAACTGGCACGGGTCACACCTGTACCACTG GAAGTCTTTGCTTTCGGCAGCCTGTGCATTATGTCGGAAGGTCGTTGCTATCTGTCGTCGTATTTGACGGGTGAGTCGCC CAACACCGTGGGCGCGTGTTCTCCGGCCCGTTTCGTGCGCTGGCAACAAACGCCGCAGGGGCTGGAATCCCGCCTGAACG AAGTGCTGATCGACCGTTATCAGGACGGCGAAAACGCAGGTTATCCGACGCTATGTAAAGGGCGTTATCTGGTGAACGGC GAGCGCTATCATGCGCTGGAAGAACCAACCAGTCTCAATACCCTGGAACTGCTGCCGGAGTTAATGGCGGCGAATATCGC TTCGGTGAAAATTGAAGGCCGCCAGCGTAGCCCGGCGTATGTCAGCCAGGTGGCGAAAGTCTGGCGTCAGGCTATCGACC GTTGTAAGGCCGATCCGCAAAACTTCATACCGCAAAGCGCGTGGATGGAGACGCTCGGGTCGATGTCCGAAGGCACGCAG ACCACCCTTGGCGCATATCACCGTAAATGGCAGTGA
Upstream 100 bases:
>100_bases CTTTAACTGCCTTAAATCAAAAATTGTCGCAGCAAGGTTAACTAAAATCCCAGTTCGTTAACATTTTTGCGTTTTGATAG CGCAACCTTCAGGAAAAATT
Downstream 100 bases:
>100_bases GAAAAGCAATGAAATATTCCTTAGGGCCAGTGCTGTGGTACTGGCCAAAAGAGACGCTGGAAGAATTTTATCAGCAGGCC GCCGCCAGCAGCGCCGACGT
Product: peptidase (collagenase-like)
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>331_residues MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRA VDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVNG ERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQNFIPQSAWMETLGSMSEGTQ TTLGAYHRKWQ
Sequences:
NA
Specific function: NA
COG id: COG0826
COG function: function code O; Collagenase and related proteases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA