Definition | Escherichia coli S88, complete genome. |
---|---|
Accession | NC_011742 |
Length | 5,032,268 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 218559959
GI number:
Start: 3221776
End: 3225303
Strand: Direct
Name: Not Available
Synonym: ECS88_3251
Alternate gene names: NA
Gene position: NA
Preceding gene: 218559958
Following gene: 218559960
Centisome position: NA
GC content: NA
Gene sequence:
>3528_bases ATGGGACTGGTAATGGATGAAAATGCTTTAGGGTTTGCCTCATACTGGCGCAACTCGCTTGCGGATGCTGAGTCAGGAAA GGGCAGTTTTGAACGGAAAGACGCCAAAAATTTCACTCACTGGCATGGGATAGCGGCGGGACGTCTTGACGAAGCGATTG TCAGTAAATTTTTTGAGGGAGAAAAAGACGATGTCGAAACGGTCGATGTCGTCTTGCGCCCAAAAGTTTATTTCCGGTTA CTGCAGCATGGTAAGGACCGTTCCGCAGGCGCACCTGATATTGTTACCCCGCTAGTGACGCCAGCCTTGCTAAGCCGTGA GGGTTTTTTATATCCGACGCCAGCGACCTCCATTCCCAGAGACCTGCTTGAACCTTTGCCAAAAGGAGCATTTTCGATTG GTGAGATTGGGCAGTATGACAAATACAAGACAATCCATACCTCGTTCTCTATCAACTTTGATGACAGCATTGATAAGACT GCCGAAACGGATGAAGAACGGGAAGCACGATATGCAGCCTTGCAGCAGGAGTGGCGTCAATATCTGGATGATTCAGAGAG GCTGCTGAAGAACGTTGCCGGCGACTGGATTAAAAATCCTGAGCAATATGAACTCGCTGAGCACGGTTATATTGTTAAAA CGGCGCAATCTGGTGGTGCCAGTTTCCATATCCTTTCGCTTTATGATCACCTGCTTGTTTGCAAGAAGGATGTGCCGCTC TTCAATCGCTTCGCCTCGCGAGAGGTTCATGCTGCAGAGTCTTTGCTGGCCCCAGGAGCAAAATTCAGCGACAGGCTTGG ACACTCCGGAGATAAGTTTCCGCTGGCAAAGGCTCAGCGCGATGCCTTAAGCCATTTTCTGGATGCAAGACATGGCGATA TCCTTGCTGTTAATGGACCTCCGGGAACCGGAAAAACCACGCTGGTGCTTTCTATCATCGCCACGCAGTGGGCCAGAGCG GCTCTCGAAAAATCTGAGCCTCCGGTTATTATCGCGACTTCAACGAACAACCAGGCTGTAACGAACATTATCGAAGCGTT CGGGAAAGATTTTTCACAGGGCACTGGTGCAATGGCCGGACGATGGTTACCTGAGCTGAAAAGCTTCGGCGCTTATTTTC CCTCAAGCACTCGTAAAGCTGAGGCAGCCAAAAAATATCAAACTGAAGATTTCTTCAACCAGGTTGAGTCAAAAGAGTAT GTAGAGGATGCACTGCTGTTTTATCTCGAGAAAGCTAAGGCAGCTTTTCCTGAAAAAGAGTGTTCATCCCCTGAAAAGGT CATTGAACTCCTGCATGGTCAGTTGGTAGCAAAATCCGAGCAATTGAAAAGACTGAACGCAACATGGCAAACGTTAAGCC AGGTACGGGCTGCGCGTGAGCTTATTGCTAATGATATTGAGCAATATCTCGATAATTTAAATAAATTACTTTCCGGACAA GAACAAAAAGTCACTCTACTGAAGAGTGCTAAAACGGAATGGAAAAAATATCGCGCCGGTGAATCACTGATCTATTCATT ATTTTCCTGGCTCCCAGCGGTTCGTAGTAAGCGACAGTACCAAATACAGCTGTTTCTCGAAGATAAATTAGGCGCGCTGA TTGCAGGAAATCAGTGGTCTGATCCTGAAACTATCGAACGTAATATTGATGGGCTGCTCAATTCCGCTGAGCGCGAGCAA ACAACATACCGGCAGCAGATTGACTCCGCCCATGAAATCGTTCTTAAAGAACAGCAGGCGGTTCAGGAGTGGCAGAGGCT GGCATTTGATTTAGGGTATGAGGGCGACGAGGAACTGAGCTTCTCACAGGCCGATGAACTGGCTGATACGCAGATTCGCT TCCCTGCATTTTTACTGACGACTCACTACTGGGAAGGTCGTTGGCTGATGGATATGGCCAGAATTGATGATCTGCAGGAA GAGAAGAAGAAAAAAGGCGCTAAAGGGGTAACCGCCCGTTGGCAACGTCGAATGAAACTCACTCCATGTGTGGTGATGAC ATGCTATATGCTGCCCGGCAATATGCAGATAAGTGAGCACAAAGGACAACGTAAATTCGAGAAAAGTTATTTGTATGATT TTGCCGATTTACTCATTGTCGATGAAGCCGGGCAGGTGCTTCCTGAAGTGGCTGCTGCCTCGTTTGCATTAGCTAAGAAG GCATTAGTGATTGGCGATACGGAGCAGATCCCGCCAATATGGAGTATTGCTCCCGCGATTGATGTCGGTAACATGCTTGC GGAAAAAATTCTGTCTGGCAGTACGCAAGAAGAGATTACCGAGAAATATACGGCAATCGCAGACCTTGGTAAAAGTGCCG CATCTGGCAGCGTTATGAAAATAGCGCAGTTTGCTTCGCGCTATCAATATGATCCCGAACTGGCTCGTGGTATGTACCTA TATGAACACCGCCGGTGCTTCGATAATATTATTGGATACTGTAATACGCTCTGCTATCACGGTAAGTTGTTGCCTAAAAG AGGGCGTGAAGAGAGCAATTTAATGCCCGCAATGGGTTATCTCCATATTGATGGTAAAGGAGAGCAGGCAAGTAGTGGAA GTAGATATAATTTGCTTGAGGCTGAAACGATAGCGGCCTGGTTGGCAGAGAACCAGCAAAATATTGAAGCGCATTACGGC AAATCGCTTCATGAAGTTGTCGGTATCGTGACGCCTTTTAGCGCGCAGGTATCCACTATCAAACAGGCGCTGGGTAAACA AGGTATCAGTACGGGCGCGAATGAAAAGTCGCTCACAGTGGGCACCGTGCACTCTCTTCAGGGAGCGGAAAGAGCGATTG TTATATTCTCGCCAGTCTATTCAAAACATGAAGACGGCGGGTTTATTGATAGCGATAACAGCATGCTGAATGTTGCAGTC TCCCGTGCGAAGGATAGCTTCCTGGTCTTCGGCGATATGGATCTGTTTGAGGTCCAGCCAGCCTCATCTCCACGGGGATT ACTGGCAAAATACCTCTTTGAGTCAGAGAAGAATGCGCTCTCTTTTGATTATAAAGAGCGTAAGGATTTAAAAACTTCCG AGACCAAAATCTACACACTTCATGGTGTGGAGCAGCATGATAACTTCCTGAATCAGACGTTCGAAAATACCGATAAACAC ATCACGATAGTTTCTCCATGGCTGACCTGGCAAAAGCTGGAGCAAACCGGTTTTCTTGATTCTATGATTGCGGCGTGTTC ACGTGGTATTAACGTCACGATAGTCACTGACAGAAGCTACAACACTGAACATAAAGATTTTGAGAAGCGAAAAGAGAAGC AGCAGAACCTTAAAGCGGCGCTGGAGAAACTGAATGCGCTGGGTATTGCTACAAAGCTGGTAAACCGTGTTCATAGCAAA ATTGTTATTGGTGATGATGGTTTGCTATGCGTGGGATCGTTCAACTGGTTTAGTGCGACACGGGAAGCGCGATATGAACG ATACGATACCTCAATGGTTTATTGCGGTGATAACCTGAAGGGTGAGATTGAGGCTATTTATAATAGTCTTGAGAGGCGTC AGGTTTAG
Upstream 100 bases:
>100_bases CGAATTATAAACAAAACATTGCATCCAACTTTTTCAATATGGACAATAGCTGTCCATACGGTGATTTTATATTCGATAAA TCAATGGATTTCATTGAGTC
Downstream 100 bases:
>100_bases AGCAGGAATGGTGAGTAGCCATCTTATCGATTGTTTTCGAGCGTAAGATGGCTGAATGGAATGGCTATTATTGCACGGTC CTTAATTATAACATTCATAC
Product: superfamily I DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1175_residues MGLVMDENALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFEGEKDDVETVDVVLRPKVYFRL LQHGKDRSAGAPDIVTPLVTPALLSREGFLYPTPATSIPRDLLEPLPKGAFSIGEIGQYDKYKTIHTSFSINFDDSIDKT AETDEEREARYAALQQEWRQYLDDSERLLKNVAGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPL FNRFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTGKTTLVLSIIATQWARA ALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLPELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEY VEDALLFYLEKAKAAFPEKECSSPEKVIELLHGQLVAKSEQLKRLNATWQTLSQVRAARELIANDIEQYLDNLNKLLSGQ EQKVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPETIERNIDGLLNSAEREQ TTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQADELADTQIRFPAFLLTTHYWEGRWLMDMARIDDLQE EKKKKGAKGVTARWQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKK ALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQFASRYQYDPELARGMYL YEHRRCFDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHIDGKGEQASSGSRYNLLEAETIAAWLAENQQNIEAHYG KSLHEVVGIVTPFSAQVSTIKQALGKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAV SRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTSETKIYTLHGVEQHDNFLNQTFENTDKH ITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSYNTEHKDFEKRKEKQQNLKAALEKLNALGIATKLVNRVHSK IVIGDDGLLCVGSFNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sequences:
NA
Specific function: NA
COG id: COG1112
COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA