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The map label for this gene is ldrD [H]

Identifier: 218550817

GI number: 218550817

Start: 3612429

End: 3612536

Strand: Reverse

Name: ldrD [H]

Synonym: EFER_3531

Alternate gene names: 218550817

Gene position: 3612536-3612429 (Counterclockwise)

Preceding gene: 218550819

Following gene: 218550815

Centisome position: 78.73

GC content: 52.78

Gene sequence:

>108_bases
ATGACGCTCGCAGAACTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTATGAT
CGTGAACTGGCTGAACAAGCGGAAGTAA

Upstream 100 bases:

>100_bases
CGTTGCAGGTATGCACCTGACAACACCACGGGGGCTAATCTTGACTCTAGACCATTCAAGAATAGCCGCGAAACGTTGTC
ATTACAACACAGGCGGCTAA

Downstream 100 bases:

>100_bases
CGTGTCATGCGGGTGTCATGCTGCCGTAATGGCAATTTGCGCCCGGACCAGGCCGCAGAGGTGAAACTCTGCGGCCTTTT
TCGTAAGAAAAATGCAACGG

Product: toxic polypeptide, small

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 35; Mature: 34

Protein sequence:

>35_residues
MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK

Sequences:

>Translated_35_residues
MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK
>Mature_34_residues
TLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK

Specific function: Toxic peptide whose overexpression causes rapid cell killing and nucleoid condensation of the host cell. Overexpression induces stress-response and a number of membrane protein genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the toxic peptide ldr family [H]

Homologues:

Organism=Escherichia coli, GI48994945, Length=35, Percent_Identity=97.1428571428571, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3883; Mature: 3752

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.6 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]