Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is yhhM [H]
Identifier: 218550729
GI number: 218550729
Start: 3508439
End: 3508798
Strand: Reverse
Name: yhhM [H]
Synonym: EFER_3440
Alternate gene names: 218550729
Gene position: 3508798-3508439 (Counterclockwise)
Preceding gene: 218550733
Following gene: 218550726
Centisome position: 76.47
GC content: 50.28
Gene sequence:
>360_bases ATGAGCAAACCACCTCTTTTCTTTATTGTTATCATTGGCTTAATCATCGTCGCCGCATCGTTTCGTTTTATGCAACAACG ACGGGAAAAAGCTGATAATGATATGGCACCGCTCCAGCAAAAGCTGGTGGTGGTGAGCAACAAGCGGGAAAAACCGATTA ACGATCGCCGTTCGCGCCAGCAGGAAGTAACTCCGGCAGGCACCAGTATGCGCTATGAGGCAAGCTTCAAACCGCAAAGC GGAGGAATGGAGCAGACGTTTCGCCTCGACGCCCAGCAGTACCATGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTA TAAAGGAACGCGCTTTGTCAGCTTTGTCAGCAAACAATAA
Upstream 100 bases:
>100_bases CCTACGGTCTTGCTTCCAGTTTAGTGGCGAGGGTGGACGGATGACAACACCATAACTGGCAGGGTATGCTTATTTCCGCA TTTTCCGATGAGGGATTAAG
Downstream 100 bases:
>100_bases GGTTATTTTTTAACGTTAAATTTCTTCTGCCAGACCAGCAGTTCAAACACGCCGAAAAGGAAAATGCGCACCTTTTCGGC GGTGGTCATCTGCGGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQS GGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVSKQ
Sequences:
>Translated_119_residues MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQS GGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVSKQ >Mature_118_residues SKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSG GMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789877, Length=119, Percent_Identity=96.6386554621849, Blast_Score=239, Evalue=4e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019635 [H]
Pfam domain/function: PF10694 DUF2500 [H]
EC number: NA
Molecular weight: Translated: 13558; Mature: 13427
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVSKQ HCCCCCCCCEEEEECCCCCCCCCCHHEEECHHHHEEEECCCCCCEEECCCCEEHEECCC >Mature Secondary Structure SKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVSKQ HCCCCCCCCEEEEECCCCCCCCCCHHEEECHHHHEEEECCCCCCEEECCCCEEHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]