Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is glgP [H]
Identifier: 218550694
GI number: 218550694
Start: 3469713
End: 3472160
Strand: Reverse
Name: glgP [H]
Synonym: EFER_3405
Alternate gene names: 218550694
Gene position: 3472160-3469713 (Counterclockwise)
Preceding gene: 218550695
Following gene: 218550693
Centisome position: 75.67
GC content: 50.04
Gene sequence:
>2448_bases ATGAATGCTCCATTTACTTATGCATCGCCCACACTTAGCGTTGAGGCTCTTAAGCATTCAATCGCCTATAAGCTGATGTT TACGATTGGCAAAGATCCTGTCATTGCCAATAAACATGAATGGCTTAACGCGACACTGTTTGCGGTGCGCGACCGCCTTG TAGAGCGCTGGTTGCGCTCTAACCGTGCGCAGTTGTCGCAGGAAACTCGCCAGGTTTACTACCTGTCGATGGAGTTTCTG ATTGGTCGAACCCTGTCCAATGCGTTGTTATCGTTAGGTATTTATGACGATGTTAAAAACGCACTGGAAGCAATGGGCTT AGATCTTGAAGAGTTGATTGATGAAGAAAATGACCCTGGCCTCGGCAACGGTGGTCTGGGGCGTCTGGCGGCCTGTTTCC TTGACTCACTGGCAACCTTAGGGCTGCCAGGTCGTGGTTATGGTATCCGTTACGACTACGGCATGTTTAAGCAGAACATC GTCAACGGCAGCCAGAAAGAGTCTCCAGACTACTGGCTGGAATATGGCAACCCGTGGGAGTTCAAACGGCACAACACCCG TTACAAAGTTCGCTTTGGCGGGCGTATCCAGCAGGAGGGTAAGAAAACTCGCTGGATTGAAACCGAAGAGATCCTCGCAG TTGCTTACGACCAGATTATCCCTGGCTACGACACTGACGCGACCAATACCTTGCGTTTGTGGAATGCTCAGGCCAGTAGT GAAATTAACCTCGGTAAATTCAACCAGGGCGACTACTTTGCCGCAGTGGAAGATAAAAACCACTCCGAGAACGTTTCCCG CGTACTTTACCCGGATGATTCCACCTACTCAGGTCGTGAGTTACGCCTGCGCCAGGAGTATTTCCTGGTCTCCGCCACCG TGCAGGATATTCTAAGCCGTCATTATCAGCTGCATAAAACCTACGACAATCTGGCGGATAAAATCGCCATTCACCTCAAC GATACCCACCCGGTGTTGTCGATCCCAGAGCTTATGCGCCTGTTGATTGATGAGCATAAGTTTAGCTGGGATGACGCGTT TGAAGTGTGTTGTCAGGTCTTCTCCTATACCAACCACACGCTGATGAGTGAAGCGCTGGAAACCTGGCCGGTAGATATGC TGGGTAAAATCCTGCCGCGTCATTTGCAGATCATCTTTGAGATCAACGACTACTTCCTGAAAACCGTGCAGGAGCAGTAT CCGAACGATACCGGTCTGCTGGGGCGTGCGTCGATCATTGATGAATCGAACGGCCGACGTGTGCGGATGGCGTGGCTGGC GGTTGTGGTTAGCCATAAAGTCAACGGTGTGTCCGAGCTGCACTCAAACCTGATGGTGCAATCGCTATTTGCGGATTTCG CGACGATTTTCCCTGGGCGCTTTACCAACGTGACGAACGGCGTAACGCCGCGTCGCTGGCTGGCTGTGGCTAACCCGTCG CTTTCCAAAGTGCTGGACGAAAATATTGGTCGTAACTGGCGTACCGACCTAAGCCAGCTCAGCGAACTTGAACAGCACTG CGATTTCCCGCTGGTTAATCGGGCAATTCACAATGCCAAGCTGGAAAACAAAAAGCGTCTGGCTATTTTTATCGCGCAAC AGCTCAACGTTGTCGTTAATCCGAAAGCGTTGTTTGATGTGCAGATCAAACGTATCCACGAGTACAAACGTCAATTGATG AATGTGCTGCATGTGATTACCCGCTACAACCGCATTAAGGCTGATCCTGATGCAGAGTGGGTGCCGCGTGTGAACATTTT TGCCGGGAAAGCTGCTTCAGCATATTACATGGCAAAACACATCATTCACCTGATCAACGATGTGGCGAAAGTGATCAATA ACGATCCGCAGATTGGCGACAAACTGAAGGTTGTATTTATCCCGAACTACAGCGTGAGTCTGGCGCAGATGATCATTCCA GCGGCTGATCTGTCAGAACAAATTTCCCTGGCAGGCACAGAAGCTTCCGGCACCAGTAATATGAAGTTTGCACTTAACGG CGCGCTGACTATCGGTACGCTGGACGGTGCGAACGTCGAGATGCTGGATCATGTCGGTGCTGACAATATCTTTATCTTTG GTAATACTGCGGAAGAAGTGGAAGAACTGCGTCGTCAGGGCTATAAGCCGCGTGAGTACTATGAGAAAGATGAAGAGCTG CATCAGGTGCTGACGCAAATTGGCAGCGGTGTTTTCAGCCCGGAAGAACCGGGGCGTTACCGGGATTTGGTGGATTCACT GATTAACTTTGGTGATCACTATCAGGTACTGGCTGATTACCGCAGTTACGTTGATTGTCAGGATAAAGTGGACGAACTGT ATGGTCGCCAGGAAGAGTGGACTGCAAAAGCAATGCTGAACATCGCTAATATGGGTTATTTCTCTTCTGACCGCACTATC AAAGAGTACGCTGATCATATCTGGCATATCGATCCGGTGAGATTGTAA
Upstream 100 bases:
>100_bases CAACGTCAGGCGATGTCAATGGACTTCAGCTGGCATGTCGCGGCGAAGTCGTACCGTGAGCTTTACTATCGCTTGAAATA GTATCCCAGGGATCACCTAT
Downstream 100 bases:
>100_bases TTATTACCTAATGACACTGCCGGGTGTTTCCATAAAGATTATCTTTAATGGAACACACGGCATTTTTTTGTATTGGTATA ATACGTAAAACGAATAATTA
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 815
Protein sequence:
>815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKNALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLHKTYDNLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQY PNDTGLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFATIFPGRFTNVTNGVTPRRWLAVANPS LSKVLDENIGRNWRTDLSQLSELEQHCDFPLVNRAIHNAKLENKKRLAIFIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKADPDAEWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQMIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEEL HQVLTQIGSGVFSPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYGRQEEWTAKAMLNIANMGYFSSDRTI KEYADHIWHIDPVRL
Sequences:
>Translated_815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKNALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLHKTYDNLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQY PNDTGLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFATIFPGRFTNVTNGVTPRRWLAVANPS LSKVLDENIGRNWRTDLSQLSELEQHCDFPLVNRAIHNAKLENKKRLAIFIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKADPDAEWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQMIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEEL HQVLTQIGSGVFSPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYGRQEEWTAKAMLNIANMGYFSSDRTI KEYADHIWHIDPVRL >Mature_815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKNALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLHKTYDNLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQY PNDTGLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFATIFPGRFTNVTNGVTPRRWLAVANPS LSKVLDENIGRNWRTDLSQLSELEQHCDFPLVNRAIHNAKLENKKRLAIFIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKADPDAEWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQMIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEEL HQVLTQIGSGVFSPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYGRQEEWTAKAMLNIANMGYFSSDRTI KEYADHIWHIDPVRL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=815, Percent_Identity=50.7975460122699, Blast_Score=806, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=812, Percent_Identity=50.4926108374384, Blast_Score=805, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=810, Percent_Identity=49.1358024691358, Blast_Score=799, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=812, Percent_Identity=49.1379310344828, Blast_Score=760, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=665, Percent_Identity=49.3233082706767, Blast_Score=692, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=815, Percent_Identity=95.8282208588957, Blast_Score=1613, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=766, Percent_Identity=47.5195822454308, Blast_Score=723, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=810, Percent_Identity=50.1234567901235, Blast_Score=823, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=810, Percent_Identity=50.1234567901235, Blast_Score=822, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=811, Percent_Identity=47.5955610357583, Blast_Score=726, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=809, Percent_Identity=49.6909765142151, Blast_Score=816, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=809, Percent_Identity=49.6909765142151, Blast_Score=816, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93102; Mature: 93102
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRS CCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHH NRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKNALEAMGLDLEELIDEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCC LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGSQKESPDYWLEYGNPWE CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCEEECCCCCC FKRHNTRYKVRFGGRIQQEGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS CCCCCCEEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HYQLHKTYDNLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQYPNDTGLLGRASIIDESNGRR HHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCCCCEEHEEECCCCCE VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFATIFPGRFTNVTNGVTPRRWLAVANPS EHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCH LSKVLDENIGRNWRTDLSQLSELEQHCDFPLVNRAIHNAKLENKKRLAIFIAQQLNVVVN HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEEC PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAEWVPRVNIFAGKAASAYYMAKH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQMIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHCCHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEEL EEEEEECEEEEEECCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCHHHHCCHHHH HQVLTQIGSGVFSPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYGRQEEW HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHH TAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVRL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRS CCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHH NRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKNALEAMGLDLEELIDEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCC LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGSQKESPDYWLEYGNPWE CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCEEECCCCCC FKRHNTRYKVRFGGRIQQEGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS CCCCCCEEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HYQLHKTYDNLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTVQEQYPNDTGLLGRASIIDESNGRR HHHHHHHHCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCCCCEEHEEECCCCCE VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFATIFPGRFTNVTNGVTPRRWLAVANPS EHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCH LSKVLDENIGRNWRTDLSQLSELEQHCDFPLVNRAIHNAKLENKKRLAIFIAQQLNVVVN HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEEC PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAEWVPRVNIFAGKAASAYYMAKH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQMIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHCCHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEEL EEEEEECEEEEEECCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCHHHHCCHHHH HQVLTQIGSGVFSPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYGRQEEW HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHH TAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVRL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]