Click here to switch to the map view.

The map label for this gene is hofP [H]

Identifier: 218550648

GI number: 218550648

Start: 3415022

End: 3415426

Strand: Reverse

Name: hofP [H]

Synonym: EFER_3358

Alternate gene names: 218550648

Gene position: 3415426-3415022 (Counterclockwise)

Preceding gene: 218550649

Following gene: 218550647

Centisome position: 74.43

GC content: 52.35

Gene sequence:

>405_bases
ATGATGGTTAAGCGCGGGATCATTATTGGGATGTCGCTACTGTTGCTGACTGGTATGCGGGATCCGTTCAGGCCACCGGA
AGATCGCTGCCAAATAGCAGAACTTACCCAATGGCATTATCGCGGCATGGTAGGCCAGGGTGAGCGAGTCATCGCCATTA
TCAGCGACAGTCAGCATAAGTGGCAGCGCGTGGAACAGCGAGATGTGTTGGAAAACGGCTGGACGATTTTACAGATAACC
CCTGAGTTTCTGACCCTTAATACCGGCAAAACATGTGAGCCGGACCAATGGCAGTGGCAAAGGCAAGGAGAAGAAAATGA
AGCAATGGATAGCCGCAATACTGATGATGGCTCTTCCCGTCGCGCAGGCCGCGAAACCCGCAAAAGTGACGTTAGTGGTG
GATGA

Upstream 100 bases:

>100_bases
GTTTTCAGACAACTTGCGGAACGGCAGATGCGCATTACGCAGTTTACGCTCGACCCGGATGAGAATGGATTACGCATAAC
CCTGCTTCTGGAGCGACTGA

Downstream 100 bases:

>100_bases
TGCACCTGTCGCACAGGTGTTACAGGCACTGGCAGAACAAGAGCGTCAGAATATCGTGGTTTCGCCGGATGTTAGTGGTC
TCGTCTCTTTGCATTTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MMVKRGIIIGMSLLLLTGMRDPFRPPEDRCQIAELTQWHYRGMVGQGERVIAIISDSQHKWQRVEQRDVLENGWTILQIT
PEFLTLNTGKTCEPDQWQWQRQGEENEAMDSRNTDDGSSRRAGRETRKSDVSGG

Sequences:

>Translated_134_residues
MMVKRGIIIGMSLLLLTGMRDPFRPPEDRCQIAELTQWHYRGMVGQGERVIAIISDSQHKWQRVEQRDVLENGWTILQIT
PEFLTLNTGKTCEPDQWQWQRQGEENEAMDSRNTDDGSSRRAGRETRKSDVSGG
>Mature_134_residues
MMVKRGIIIGMSLLLLTGMRDPFRPPEDRCQIAELTQWHYRGMVGQGERVIAIISDSQHKWQRVEQRDVLENGWTILQIT
PEFLTLNTGKTCEPDQWQWQRQGEENEAMDSRNTDDGSSRRAGRETRKSDVSGG

Specific function: Required for the use of extracellular DNA as a nutrient [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082256, Length=134, Percent_Identity=64.9253731343284, Blast_Score=189, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019684 [H]

Pfam domain/function: PF10748 DUF2531 [H]

EC number: NA

Molecular weight: Translated: 15446; Mature: 15446

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVKRGIIIGMSLLLLTGMRDPFRPPEDRCQIAELTQWHYRGMVGQGERVIAIISDSQHK
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHH
WQRVEQRDVLENGWTILQITPEFLTLNTGKTCEPDQWQWQRQGEENEAMDSRNTDDGSSR
HHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCH
RAGRETRKSDVSGG
HCCCHHHCCCCCCC
>Mature Secondary Structure
MMVKRGIIIGMSLLLLTGMRDPFRPPEDRCQIAELTQWHYRGMVGQGERVIAIISDSQHK
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHH
WQRVEQRDVLENGWTILQITPEFLTLNTGKTCEPDQWQWQRQGEENEAMDSRNTDDGSSR
HHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCH
RAGRETRKSDVSGG
HCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]