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The map label for this gene is yhfU

Identifier: 218550634

GI number: 218550634

Start: 3401812

End: 3402165

Strand: Reverse

Name: yhfU

Synonym: EFER_3344

Alternate gene names: 218550634

Gene position: 3402165-3401812 (Counterclockwise)

Preceding gene: 218550635

Following gene: 218550633

Centisome position: 74.14

GC content: 48.02

Gene sequence:

>354_bases
ATGAAAAAGATTGGCGTTGCAGGCTTACAGCGTGAGCAGATTAAAAAAACCATTGAAGCGACGGCTCCTGGCTGTTTTGA
AGTTTTCATTCATAACGACATGGAAGCGGCAATGAAAGTGAAATCCGGGCAACTGGATTATTACATCGGTGCGTGTAATA
CCGGTGCGGGCGCGGCATTGTCGATTGCCATCGCGGTGATTGGCTATAACAAAAGTTGCACCATTGCCAAGCCGGGCATT
AAAGCGAAAGACGAGCATATCGCCAAAATGATCGCCGAAGGGAAAGTGGCGTTTGGGCTTTCCGTTGAGCACGTCGAACA
CGCGATTCCGATGCTGATTAACCATCTGAAATAA

Upstream 100 bases:

>100_bases
ACCTTTATTCCGCAATTGCGCCAGTCAGGATTCAGTCAGGCCGATGTGGATGTGATGTTACGTGAAAATCCCTCTCAATT
TTTCCAATAAGGACAGACTA

Downstream 100 bases:

>100_bases
AAGGCACGACTATGGATCTGTATATTCAGATTATCGTGGTGGCGTGCCTGACGGGTATGACATCGCTTCTGGCGCATCGC
TCGGCGGCTGTTTTTCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGI
KAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK

Sequences:

>Translated_117_residues
MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGI
KAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK
>Mature_117_residues
MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGI
KAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082253, Length=117, Percent_Identity=100, Blast_Score=236, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHFU_ECOL6 (P64632)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_756012.1
- ProteinModelPortal:   P64632
- EnsemblBacteria:   EBESCT00000041847
- GeneID:   1036684
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c4148
- GeneTree:   EBGT00050000010699
- HOGENOM:   HBG700367
- ProtClustDB:   CLSK872758
- InterPro:   IPR021238
- InterPro:   IPR003500
- Gene3D:   G3DSA:3.40.1400.10

Pfam domain/function: PF10941 DUF2620

EC number: NA

Molecular weight: Translated: 12479; Mature: 12479

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCHHE
SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK
EEEEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL
CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCHHE
SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK
EEEEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157