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The map label for this gene is yhfS [H]

Identifier: 218550632

GI number: 218550632

Start: 3399399

End: 3400484

Strand: Reverse

Name: yhfS [H]

Synonym: EFER_3342

Alternate gene names: 218550632

Gene position: 3400484-3399399 (Counterclockwise)

Preceding gene: 218550633

Following gene: 218550626

Centisome position: 74.11

GC content: 55.71

Gene sequence:

>1086_bases
ATGAAGACGTTTCCTTTGCAAAGCCTGACGCTTATTGAAGCGCAGCAAAAGCAGTTTGCGTTGGTGGATACGATTTGCCG
TCATTTTCCCGGCAGCGAGTTTCTTACCAGCGGTGATTTGGGGTTAACCCCAGGGCTGAATCAACCGCGTATTACCCAAC
GGGTGGAGCAGGTGCTGGCTGATGCGTTTCATGCGCAAGCGGCTGCGCTGGTGCAGGGGGCGGGTACTGGAGCGATTCGT
GCGGCGCTGGCAGCTTTGCTCAAACCGGGGCAGCGTCTTCTGGTGCATGACGCGCCTGTTTACCCGACGACTCAGGTCAT
TATTGAGCAGATGGGGCTGACGCTTATTACTGCTGATTTCAACAACCTGTCGGCGCTTAAACAGGCCATTGAAGAGCAAC
AACCAGATGCCGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTATGTACTGGCAGATGTGCTGGCAACGCTG
CGCGCTGCAGGTGTTCCAGCCTTAACCGATGACAACTATGCGGTGATGAAGGTGGCGCGAATTGGCTGCGAATGCGGGGC
AAATGTCTCGACATTTTCCTGCTTCAAGCTGTTTGGGCCAGAGGGTGTTGGCGCGGTGGTAGGCGATGCCGATGTTATCA
ACCGTATTCGCGCTACGCTTTACTCTGGCGGCAGCCAGATTCAGGGCGCGCAGGCGTTGGAAGTATTGCGAGGTCTGGTG
TTTGCGCCAGTGATGCACGCGGTGCAGGCGGGGGTGTCTGAACGGTTGCTGGCTTTACTTAACGGTGGAGCGGTGGCGGA
AGTTAAAAGCGCCGTTATTGCTAATGCGCAGTCGAAGGTGTTGATTGTGGAGTTTCATCAGCCGATTGCCGCCAGAGTGC
TTGAAGAGGCGCAAAAGCGCGGCGCGTTGCCTTACCCGGTCGGCGCAGAGTCGAAATATGAAATCCCGCCACTTTTTTAT
CGACTTTCCGGGACGTTTCGGCAGGCGAATCCACAACTCGAACATTGCGCGATTCGCATTAATCCGAATCGCAGCGGTGA
AGAGACGGTATTGCGGATTTTGCGTGAGAGTATTGCCAGTATTTAA

Upstream 100 bases:

>100_bases
AGAAAATGGCGGCACCGGTCGTAGCAGTAATGATCACTGGCATCCTGCTGAATGTTCTTTACTGGCTTGGTCTGTTCGTT
CCGGCTTAAAGAAGGCACCT

Downstream 100 bases:

>100_bases
TCTTGAGAACGATGTTTTCGAAAAGAACTCAGAAACAAATACGCCCTCGGGTAATCCCGAGGGCGTCAGGCAATTAAATC
GACATTAACCTATTTCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKTFPLQSLTLIEAQQKQFALVDTICRHFPGSEFLTSGDLGLTPGLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIR
AALAALLKPGQRLLVHDAPVYPTTQVIIEQMGLTLITADFNNLSALKQAIEEQQPDAALVQHTRQQPQDSYVLADVLATL
RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
FAPVMHAVQAGVSERLLALLNGGAVAEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFY
RLSGTFRQANPQLEHCAIRINPNRSGEETVLRILRESIASI

Sequences:

>Translated_361_residues
MKTFPLQSLTLIEAQQKQFALVDTICRHFPGSEFLTSGDLGLTPGLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIR
AALAALLKPGQRLLVHDAPVYPTTQVIIEQMGLTLITADFNNLSALKQAIEEQQPDAALVQHTRQQPQDSYVLADVLATL
RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
FAPVMHAVQAGVSERLLALLNGGAVAEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFY
RLSGTFRQANPQLEHCAIRINPNRSGEETVLRILRESIASI
>Mature_361_residues
MKTFPLQSLTLIEAQQKQFALVDTICRHFPGSEFLTSGDLGLTPGLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIR
AALAALLKPGQRLLVHDAPVYPTTQVIIEQMGLTLITADFNNLSALKQAIEEQQPDAALVQHTRQQPQDSYVLADVLATL
RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
FAPVMHAVQAGVSERLLALLNGGAVAEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFY
RLSGTFRQANPQLEHCAIRINPNRSGEETVLRILRESIASI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789777, Length=361, Percent_Identity=96.398891966759, Blast_Score=685, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: NA

Molecular weight: Translated: 38615; Mature: 38615

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFPLQSLTLIEAQQKQFALVDTICRHFPGSEFLTSGDLGLTPGLNQPRITQRVEQVLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH
DAFHAQAAALVQGAGTGAIRAALAALLKPGQRLLVHDAPVYPTTQVIIEQMGLTLITADF
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEEECC
NNLSALKQAIEEQQPDAALVQHTRQQPQDSYVLADVLATLRAAGVPALTDDNYAVMKVAR
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
HHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FAPVMHAVQAGVSERLLALLNGGAVAEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKR
HHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHC
GALPYPVGAESKYEIPPLFYRLSGTFRQANPQLEHCAIRINPNRSGEETVLRILRESIAS
CCCCCCCCCCCCCCCCCHHEECCCCHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHC
I
C
>Mature Secondary Structure
MKTFPLQSLTLIEAQQKQFALVDTICRHFPGSEFLTSGDLGLTPGLNQPRITQRVEQVLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH
DAFHAQAAALVQGAGTGAIRAALAALLKPGQRLLVHDAPVYPTTQVIIEQMGLTLITADF
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEEECC
NNLSALKQAIEEQQPDAALVQHTRQQPQDSYVLADVLATLRAAGVPALTDDNYAVMKVAR
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV
HHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FAPVMHAVQAGVSERLLALLNGGAVAEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKR
HHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHC
GALPYPVGAESKYEIPPLFYRLSGTFRQANPQLEHCAIRINPNRSGEETVLRILRESIAS
CCCCCCCCCCCCCCCCCHHEECCCCHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]