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The map label for this gene is yheO [H]

Identifier: 218550607

GI number: 218550607

Start: 3376703

End: 3377425

Strand: Reverse

Name: yheO [H]

Synonym: EFER_3316

Alternate gene names: 218550607

Gene position: 3377425-3376703 (Counterclockwise)

Preceding gene: 218550608

Following gene: 218550606

Centisome position: 73.6

GC content: 46.06

Gene sequence:

>723_bases
ATGTCCAGGTCGCTTTTAACCAACGAAACCAGTGAGTTGGATTTACTGGATCAACGTCCTTTCGACCAGAGCGATTTTGA
TATTCTGAAATCCTACGAAGCGGTGGTGGACGGGTTAGCGATGCTCATTGGCTCCCATTGTGAAATCGTTTTGCACTCTT
TGCAGGATTTAAAATGTTCAGCCATTCGTATTGCTAACGGTGAACATACAGGCCGGAAGATTGGTTCGCCAATTACTGAC
CTGGCGTTACGTATGCTGCACGATATGACTGGCGCGGATAGCAGCGTTTCTAAATGCTACTTTACTCGCGCCAAAAGCGG
CGTATTAATGAAGTCGCTGACTATCGCCATTCGTAACCGCGAACAGCGTGTAATTGGCCTGCTGTGCATTAATATGAACC
TCGATGTTCCTTTCTCGCAGATTATGAGCACCTTCGTGCCACCAGAGACGCCGGACGTCGGCTCAAATGTCAACTTTGCT
TCCTCTGTAGAAGATCTGGTTACCCAAACGCTGGAGTTCACCATCGAAGAAGTGAATGCCGATCGCAATGTTTCCAATAA
CGCCAAAAATCGCCAGATCGTGCTGAATCTTTACGAGAAAGGGATCTTCGATATTAAAGACGCGATTAATCAGGTTGCTG
ATCGTCTGAATATTTCCAAACATACTGTTTATCTCTATATTCGCCAGTTCAAAAGTGGCGACTTCCTGGGGCAAGATAAG
TAA

Upstream 100 bases:

>100_bases
GAAAGCGGAACCTCCGCTGTATTAATTTAGTTACCCGCATCATTAATGAGCCTGCCCTGAAAACATAACGACAGGTTCCT
GAAAAGGAGTGTTTTTTTTC

Downstream 100 bases:

>100_bases
TGCGTTTTGCCATCGTGGTGACCGGGCCAGCATACGGTACGCAACAGGCGAGTAGTGCTTTTCAGTTTGCGCAGGCACTG
ATAGCCGAAGGCCATGAACT

Product: DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSRSLLTNETSELDLLDQRPFDQSDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITD
LALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSNVNFA
SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFLGQDK

Sequences:

>Translated_240_residues
MSRSLLTNETSELDLLDQRPFDQSDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITD
LALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSNVNFA
SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFLGQDK
>Mature_239_residues
SRSLLTNETSELDLLDQRPFDQSDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDL
ALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSNVNFAS
SVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFLGQDK

Specific function: Unknown

COG id: COG2964

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0575 [H]

Homologues:

Organism=Escherichia coli, GI87082246, Length=240, Percent_Identity=98.75, Blast_Score=489, Evalue=1e-140,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013559
- ProDom:   PD037769 [H]

Pfam domain/function: PF08348 PAS_6 [H]

EC number: NA

Molecular weight: Translated: 26819; Mature: 26688

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSLLTNETSELDLLDQRPFDQSDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS
CCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
AIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNR
EEEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
EQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSNVNFASSVEDLVTQTLEFTIEEVNA
CCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFLGQDK
CCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SRSLLTNETSELDLLDQRPFDQSDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS
CCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
AIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNR
EEEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC
EQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSNVNFASSVEDLVTQTLEFTIEEVNA
CCEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFLGQDK
CCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]