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The map label for this gene is yqeI [H]

Identifier: 218550093

GI number: 218550093

Start: 2845989

End: 2846912

Strand: Direct

Name: yqeI [H]

Synonym: EFER_2778

Alternate gene names: 218550093

Gene position: 2845989-2846912 (Clockwise)

Preceding gene: 218550092

Following gene: 218550094

Centisome position: 62.02

GC content: 41.77

Gene sequence:

>924_bases
ATGACGAGTACAGGTAAAAAAACAATCAGCATTACTTCTATATATGCAATAATAGCTATATTAACTCAGAGATATTCCGG
GTTATTTAATTTTATCAACATGTCTTGTGACGTATATATGTACTGGATTATTAACGAGTTTATTGAATTTAGACCCGCGA
GTAAAAAGCTCATTTCCCGGAGAAATCCTGAGCTTAATGTTGTATTAACGTCACCAGCCAGTCGTTGTCTGCTTCTTTTA
CTTGAAGCCTCTCCTGATGTCGTTTCCCAACAAGAACTTTTCAAAAAAGTGTGGGAAGATGAAGGAATGTATGTTCCGAC
CAACACCCTTTACCAGAATATTTCCATTGTCCGTCGGGGGCTGAAAGCGGTAGGTGAAACGGAACAAACACTGATAGCCA
CCATACCGCGCAAAGGGTTTAAGATTGAGCAGGGCGTTAAGATTGTCCGCATGGCTTCAGACGAACTTTTCCCTGAAGAA
GAGCAAGAAGAAGAACAGACAGGTAATGCAGAGGAATTGTTATTACCCGTAAATGAGCATCAGCAACCACGAATATCTCT
GATGTCGCGTTTATCTCTGGTTTTTATCATGCTCTTAGCCTTTATTGTTGGCGCTACCGGAATGCATTTTTATTGGCATT
CCGGGGAAACCACGCCCTTTTTCGCGGACTACAAACTGCTCGAGCAAGAGAATGGTTGTCATTTCTATGTTAAAGATGAC
AGCCATGATGGTGACAATAATTTTGCGCGAATCAAAACGCTCATCACCCGTACCGGACTGGATTGTAAAAAATATCCCTG
GGTTTATCTTCCACTCTCAAAAACCGATCCAGGGTTGGCAGTATTAGTTTGTAAGAAAGACTATCTTGTTCATTCTGTTC
CTGGCTGCATGACACTCTCATTTCGCGAGGCTTACGGTGAGTAA

Upstream 100 bases:

>100_bases
TTATCGCCTTCCTGCAACTTGAATTATTTAGAGTATAGTCCAATAATTCCCTGCATTCGTACCATTATTAATTATACTCG
TCATACCTCAAGTTGCATGT

Downstream 100 bases:

>100_bases
AAAATATATCATTCTCTGCGCCGCGATTTGCTGCCTTCTGGGTATGGGTGCTGCTTTGGTATACCACTACTTACGCTTCG
AGCATACCTATAAAGAAGAA

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTSTGKKTISITSIYAIIAILTQRYSGLFNFINMSCDVYMYWIINEFIEFRPASKKLISRRNPELNVVLTSPASRCLLLL
LEASPDVVSQQELFKKVWEDEGMYVPTNTLYQNISIVRRGLKAVGETEQTLIATIPRKGFKIEQGVKIVRMASDELFPEE
EQEEEQTGNAEELLLPVNEHQQPRISLMSRLSLVFIMLLAFIVGATGMHFYWHSGETTPFFADYKLLEQENGCHFYVKDD
SHDGDNNFARIKTLITRTGLDCKKYPWVYLPLSKTDPGLAVLVCKKDYLVHSVPGCMTLSFREAYGE

Sequences:

>Translated_307_residues
MTSTGKKTISITSIYAIIAILTQRYSGLFNFINMSCDVYMYWIINEFIEFRPASKKLISRRNPELNVVLTSPASRCLLLL
LEASPDVVSQQELFKKVWEDEGMYVPTNTLYQNISIVRRGLKAVGETEQTLIATIPRKGFKIEQGVKIVRMASDELFPEE
EQEEEQTGNAEELLLPVNEHQQPRISLMSRLSLVFIMLLAFIVGATGMHFYWHSGETTPFFADYKLLEQENGCHFYVKDD
SHDGDNNFARIKTLITRTGLDCKKYPWVYLPLSKTDPGLAVLVCKKDYLVHSVPGCMTLSFREAYGE
>Mature_306_residues
TSTGKKTISITSIYAIIAILTQRYSGLFNFINMSCDVYMYWIINEFIEFRPASKKLISRRNPELNVVLTSPASRCLLLLL
EASPDVVSQQELFKKVWEDEGMYVPTNTLYQNISIVRRGLKAVGETEQTLIATIPRKGFKIEQGVKIVRMASDELFPEEE
QEEEQTGNAEELLLPVNEHQQPRISLMSRLSLVFIMLLAFIVGATGMHFYWHSGETTPFFADYKLLEQENGCHFYVKDDS
HDGDNNFARIKTLITRTGLDCKKYPWVYLPLSKTDPGLAVLVCKKDYLVHSVPGCMTLSFREAYGE

Specific function: Unknown

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.cholerae cholera toxin transcriptional activator (toxR) [H]

Homologues:

Organism=Escherichia coli, GI1789213, Length=272, Percent_Identity=48.5294117647059, Blast_Score=273, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 35049; Mature: 34918

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTGKKTISITSIYAIIAILTQRYSGLFNFINMSCDVYMYWIINEFIEFRPASKKLISR
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCHHHHHHHC
RNPELNVVLTSPASRCLLLLLEASPDVVSQQELFKKVWEDEGMYVPTNTLYQNISIVRRG
CCCCEEEEEECCHHHEEEEEEECCCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHH
LKAVGETEQTLIATIPRKGFKIEQGVKIVRMASDELFPEEEQEEEQTGNAEELLLPVNEH
HHHHCCCHHHEEEECCCCCCCHHHCCEEEEECCCCCCCCCHHHHHHCCCHHHEEEECCCC
QQPRISLMSRLSLVFIMLLAFIVGATGMHFYWHSGETTPFFADYKLLEQENGCHFYVKDD
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHEEECCCCCEEEEECC
SHDGDNNFARIKTLITRTGLDCKKYPWVYLPLSKTDPGLAVLVCKKDYLVHSVPGCMTLS
CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEECCCCEEEEE
FREAYGE
HHHHCCC
>Mature Secondary Structure 
TSTGKKTISITSIYAIIAILTQRYSGLFNFINMSCDVYMYWIINEFIEFRPASKKLISR
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCHHHHHHHC
RNPELNVVLTSPASRCLLLLLEASPDVVSQQELFKKVWEDEGMYVPTNTLYQNISIVRRG
CCCCEEEEEECCHHHEEEEEEECCCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHH
LKAVGETEQTLIATIPRKGFKIEQGVKIVRMASDELFPEEEQEEEQTGNAEELLLPVNEH
HHHHCCCHHHEEEECCCCCCCHHHCCEEEEECCCCCCCCCHHHHHHCCCHHHEEEECCCC
QQPRISLMSRLSLVFIMLLAFIVGATGMHFYWHSGETTPFFADYKLLEQENGCHFYVKDD
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHEEECCCCCEEEEECC
SHDGDNNFARIKTLITRTGLDCKKYPWVYLPLSKTDPGLAVLVCKKDYLVHSVPGCMTLS
CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEECCCCEEEEE
FREAYGE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]