Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is fhiA [H]
Identifier: 218550066
GI number: 218550066
Start: 2808563
End: 2810692
Strand: Direct
Name: fhiA [H]
Synonym: EFER_2751
Alternate gene names: 218550066
Gene position: 2808563-2810692 (Clockwise)
Preceding gene: 218550057
Following gene: 218550079
Centisome position: 61.21
GC content: 58.08
Gene sequence:
>2130_bases TTGTTGTCGAGCGAGTCGAACACTGGCGCGAGCTCCACCAGCAGCGTTTTAAAGAACGGCATAATCTTCGCGCTGCCGCG CTCAAACATATTGCGGTTCTGGTCGTCTTTAATTAGCACGCGCAATCCCTGCGGGACAATCTCCATCTCCAGATTCGCTT CCATATGCGCATCACGGGCGATGGTGTTGATACTGGTCGCCAGCTCGCCAAGCTCAGTGGCGGACTTCTTCTTCAGTAGC GCCGTTTTCTCGTTGACGTCGCGCGCTTTTTTCTCCGTCTCTTCCGGCACCGCCACGGTGGCAGGTTTCGGCGGATGCGT AGGGCTGATTTTATTTAACGGCGACAGCCCGCCGCCATTGAAAATCGACTGCCCGTGCAGCGCGGCGATAATGCTTTCAC GCTCGGATTTACTGACGCTGTTCACTATCAACTTTATCGTCGTCACCAAAGGGGCCGAGCGTATTTCCGAGGTTTCTGCC CGCTTTACCCTGGACGCGATGCCCGGCAAGCAGATGGCGATTGACGCCGATCTTAACGCCGGGTTGATCAACCAGGCGCA GGCGCAAACCCGGCGTAAAGATGTTGCCAGCGAGGCCGATTTCTACGGTGCAATGGACGGGGCATCGAAGTTTGTGCGCG GGGATGCCATCGCCGGGATGATGATTCTGGCGATCAACCTGATCGGCGGCGTCTGTATCGGGATCTTCAAATACAACCTG AGCGCCGACGCCGCCTTCCAGCAGTATGTGCTGATGACCATCGGCGACGGGCTGGTGGCGCAGATCCCGTCCCTGCTGCT CTCCACCGCGGCGGCAATTATCGTCACCCGCGTCAGCGACAACGGCGATATCGCCCATGACGTGCGCCACCAGCTGCTGG CAAGCCCGTCGGTGCTCTACACCGCCACCGGGATCATGTTTGTGCTGGCGGTGGTGCCGGGGATGCCGCACCTGCCGTTT TTGCTGTTCAGCGCCCTGCTTGGCTTTACCGGCTGGCGGATGAGCAAACGCCCGCAGGCGGCGGAGGCGGAAGAGAAAAG CCTCGAAACGCTGACCCGCACCATCACCGAAACCAGCGAGCAACAGGTCAGTTGGGAAACCATTCCGCTGATCGAGCCCA TCAGCTTAAGCCTCGGTTACAAGTTGGTGGCGCTGGTGGACAAAGCGCAGGGCAACCCGCTCACCCAGCGGATTCGCGGC GTGCGGCAGGTGATTTCCGACGGCAACGGCGTGCTGCTGCCGGAGATCCGCATTCGCGAAAACTTCCGCCTCAAGCCCAG CCAGTACGCCATTTTCATCAACGGCATTAAGGCTGATGAAGCTGATATTCCGGCGGATAAACTGATGGCCCTGCCCTCCA GTGAAACCTACGGTGAGATTGACGGCGTGCTGGGGAACGACCCGGCGTATGGGATGCCGGTCACCTGGATCCAGCCTACG CAGAAAGCGAAAGCGCTGAATATGGGGTATCAGGTGATCGACAGCGCCAGCGTAATTGCCACACATGTGAATAAGATTGT GCGCAGCTATATTCCTGATTTGTTTAACTATGACGATATTACTCAGCTGCATAACCGTTTGTCGTCGATGGCACCGCGCC TGTCGGAGGATTTGAGCGCGGCGCTGAATTACAGCCAGTTGCTGAAAGTGTACCGGGCGCTACTGACTGAAGGCGTTTCC CTGCGCGATATCGTCACCATCGCCACCGTGCTGGTCGCCAGTAGCACCGTCACCAAAGATCATATTCTGCTGGCGGCCGA TGTGCGCCTGGCACTGCGGCGGAGCATTACCCATCCGTTCGTTCGCAAGCAGGAGCTGACGGTGTATACGCTGAATAATG AGCTGGAAAATCTGCTGACCAATGTGGTGAATCAGGCGCAACAGGCTGGCAAAGTGATGCTCGACAGCGTGCCGGTGGAC CCGAATATGCTCAACCAGTTCCAGAACACGATGCCGCAGGTGAAAGAGCAGATGAAAGCGGCAGGGAAAGATCCGGTGCT GCTGGTGCCGCCGCAGTTGCGCCCGTTGCTGGCGCGTTATGCGAAGTTGTTTGCGCCGGGGTTGCATGTGCTGTCGTATA ACGAAGTGCCGGACGAGCTGGAGTTGAAGATTATGGGGGCGTTGAGTTGA
Upstream 100 bases:
>100_bases CACCCGACGAGCCGAAAGCGCGCGGTCACCCGAAAGGTTCCAGTTGTTGTAGATATTGCTTTTATAGGCCATCGCATCGG TATGCCCGGTAATAATAATT
Downstream 100 bases:
>100_bases TGGCTTTTAAGGGGCGCTGCACAACTGCCGGATGTGGCATAAATGCCTTATCCGGCAGTCAATATTTATCACAACATGTG ACGTTTAAACTCTGAACAAT
Product: flagellar system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 709; Mature: 709
Protein sequence:
>709_residues MLSSESNTGASSTSSVLKNGIIFALPRSNILRFWSSLISTRNPCGTISISRFASICASRAMVLILVASSPSSVADFFFSS AVFSLTSRAFFSVSSGTATVAGFGGCVGLILFNGDSPPPLKIDCPCSAAIMLSRSDLLTLFTINFIVVTKGAERISEVSA RFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNL SADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAVVPGMPHLPF LLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRG VRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPT QKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLSEDLSAALNYSQLLKVYRALLTEGVS LRDIVTIATVLVASSTVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQAGKVMLDSVPVD PNMLNQFQNTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYAKLFAPGLHVLSYNEVPDELELKIMGALS
Sequences:
>Translated_709_residues MLSSESNTGASSTSSVLKNGIIFALPRSNILRFWSSLISTRNPCGTISISRFASICASRAMVLILVASSPSSVADFFFSS AVFSLTSRAFFSVSSGTATVAGFGGCVGLILFNGDSPPPLKIDCPCSAAIMLSRSDLLTLFTINFIVVTKGAERISEVSA RFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNL SADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAVVPGMPHLPF LLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRG VRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPT QKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLSEDLSAALNYSQLLKVYRALLTEGVS LRDIVTIATVLVASSTVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQAGKVMLDSVPVD PNMLNQFQNTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYAKLFAPGLHVLSYNEVPDELELKIMGALS >Mature_709_residues MLSSESNTGASSTSSVLKNGIIFALPRSNILRFWSSLISTRNPCGTISISRFASICASRAMVLILVASSPSSVADFFFSS AVFSLTSRAFFSVSSGTATVAGFGGCVGLILFNGDSPPPLKIDCPCSAAIMLSRSDLLTLFTINFIVVTKGAERISEVSA RFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNL SADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAVVPGMPHLPF LLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRG VRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPT QKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLSEDLSAALNYSQLLKVYRALLTEGVS LRDIVTIATVLVASSTVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQAGKVMLDSVPVD PNMLNQFQNTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYAKLFAPGLHVLSYNEVPDELELKIMGALS
Specific function: Not Known. [C]
COG id: COG1298
COG function: function code NU; Flagellar biosynthesis pathway, component FlhA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]
Homologues:
Organism=Escherichia coli, GI1788187, Length=564, Percent_Identity=40.2482269503546, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001712 [H]
Pfam domain/function: PF00771 FHIPEP [H]
EC number: NA
Molecular weight: Translated: 76678; Mature: 76678
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00994 FHIPEP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSSESNTGASSTSSVLKNGIIFALPRSNILRFWSSLISTRNPCGTISISRFASICASRA CCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCC MVLILVASSPSSVADFFFSSAVFSLTSRAFFSVSSGTATVAGFGGCVGLILFNGDSPPPL EEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCEEEEEEECCCCCCCE KIDCPCSAAIMLSRSDLLTLFTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNA EEECCCCEEEEECCCCEEEEEEEEEEEEECCHHHHHHHHHHEEEECCCCCCEEEECCCCC GLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNL CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLY CCHHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCHHH TATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSE HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHH QQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRE HHCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCEEECC NFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPT CCCCCCCCEEEEEECCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEEECCC QKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLSEDLSA HHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSTVTKDHILLAADVRLALRRSITHPF HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCH VRKQELTVYTLNNELENLLTNVVNQAQQAGKVMLDSVPVDPNMLNQFQNTMPQVKEQMKA HCCCCEEEEEECHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH AGKDPVLLVPPQLRPLLARYAKLFAPGLHVLSYNEVPDELELKIMGALS CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCC >Mature Secondary Structure MLSSESNTGASSTSSVLKNGIIFALPRSNILRFWSSLISTRNPCGTISISRFASICASRA CCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCC MVLILVASSPSSVADFFFSSAVFSLTSRAFFSVSSGTATVAGFGGCVGLILFNGDSPPPL EEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCEEEEEEECCCCCCCE KIDCPCSAAIMLSRSDLLTLFTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNA EEECCCCEEEEECCCCEEEEEEEEEEEEECCHHHHHHHHHHEEEECCCCCCEEEECCCCC GLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNL CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLY CCHHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCHHH TATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSE HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHH QQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRE HHCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCEEECC NFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPT CCCCCCCCEEEEEECCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEEECCC QKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSMAPRLSEDLSA HHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH ALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSTVTKDHILLAADVRLALRRSITHPF HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCH VRKQELTVYTLNNELENLLTNVVNQAQQAGKVMLDSVPVDPNMLNQFQNTMPQVKEQMKA HCCCCEEEEEECHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH AGKDPVLLVPPQLRPLLARYAKLFAPGLHVLSYNEVPDELELKIMGALS CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7596361; 9278503 [H]