| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549352
Identifier: 218549352
GI number: 218549352
Start: 2069776
End: 2070783
Strand: Direct
Name: 218549352
Synonym: EFER_2020
Alternate gene names: NA
Gene position: 2069776-2070783 (Clockwise)
Preceding gene: 218549351
Following gene: 218549353
Centisome position: 45.11
GC content: 52.88
Gene sequence:
>1008_bases ATGGCGATTTATACCCGTACCGGCGATAAAGGCACAACCGCCCTGTTTACCGGTCAACGCGTCAGCAAAACCCATCCGCG AGTTGAAACCTACGGCACGTTGGATGAGTTAAATGCGGCGTTGAGTTTGTGTCGCTGCGCGGTAGAAAGCCCGGAGCGCC GCAGCCTGCTGGAAGCCGTCCAGTTACAAATATTCTGGTTTAGTGCCGAACTCGCCAGCGAAAGTGAACAACCTTCAGCG CAACAACAGAGTATCAGTGCCAGAGAGATAGCCGAACTGGAGGCGGCCATCGATCATGCAATGAGTCGTGTTCCGCCTGT TCACAGTTTTATTTTACCTGGTCGTAGTGAAGCTGCCAGCCGACTGCATTTTGCCCGAACGTTAGCGCGTCGGGCGGAAC GTCGCCTGGTGGAACTTAGCGAGCAGTTCCCCGTCCGGAATGAACTCCAGCGTTATATCAACCGCCTGTCAGACTGCTTA TATGCTCTGGCTCGCGCAGAAGATCATGAAAATCATCAAAAAAATCTTATTCAGGAAGTGACCGCCCGCTATCTGGCTGC GGTTACCACCCAAACGCATAAGGAATCTGCTATGTCGCTCTCATTTCAGGAACTTCATCTGTTAACCCGTGCTGCAATTG CGCGCGCCGAAGAACTTCACATTCCGGTAGTCATCAGCGTCGTTGATGCTAATGGTACGGAGTCAGTCACCTGGCGGATG CCTGATGCCCTTCTGGTCAGCAGTGAGTTGGCACCCAAAAAAGCCTGGACTGCTGTGGCAATGAAGATGGCAACTCACGA TCTTGCCGCGGCGGTGCAACCTGGCGCATCGCTTTATGGGCTTGATACCCACATGCAAGGCAAAGTTGTTACCTTCGGCG GTGGCTTTCCATTATGGCGTGACGGTTCAATTGTCGGTGGACTCGGAGTCAGTGGCGGCAGTGTAGAACAAGATATGGAT ATTGCTCAGACCGCTGCAGCGGCAATCAATGTGAGAACAATGAAATGA
Upstream 100 bases:
>100_bases AGTGGCTCCAGTGCCCGTCAGGTATTCACTTCACCAAATGAAGCCATCGATCTGGCTATCGTCGGCATTGTCGACTCGAT TTCTCGTTAAGGAGTGAGTA
Downstream 100 bases:
>100_bases ATACCCGCGAACTGGAAAACATCATCCGCAATATTCTGCGCGAACAACTGAGCACAACAGCAGATGCCCCGACGAATGGC ATTTTTGATTCTGTTGATGA
Product: propanediol utilization protein: B12 related pduO, Bifunctional ATP:cob(I)alamin adenosyltransferase/GlcG domain
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase; ORFW [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MAIYTRTGDKGTTALFTGQRVSKTHPRVETYGTLDELNAALSLCRCAVESPERRSLLEAVQLQIFWFSAELASESEQPSA QQQSISAREIAELEAAIDHAMSRVPPVHSFILPGRSEAASRLHFARTLARRAERRLVELSEQFPVRNELQRYINRLSDCL YALARAEDHENHQKNLIQEVTARYLAAVTTQTHKESAMSLSFQELHLLTRAAIARAEELHIPVVISVVDANGTESVTWRM PDALLVSSELAPKKAWTAVAMKMATHDLAAAVQPGASLYGLDTHMQGKVVTFGGGFPLWRDGSIVGGLGVSGGSVEQDMD IAQTAAAAINVRTMK
Sequences:
>Translated_335_residues MAIYTRTGDKGTTALFTGQRVSKTHPRVETYGTLDELNAALSLCRCAVESPERRSLLEAVQLQIFWFSAELASESEQPSA QQQSISAREIAELEAAIDHAMSRVPPVHSFILPGRSEAASRLHFARTLARRAERRLVELSEQFPVRNELQRYINRLSDCL YALARAEDHENHQKNLIQEVTARYLAAVTTQTHKESAMSLSFQELHLLTRAAIARAEELHIPVVISVVDANGTESVTWRM PDALLVSSELAPKKAWTAVAMKMATHDLAAAVQPGASLYGLDTHMQGKVVTFGGGFPLWRDGSIVGGLGVSGGSVEQDMD IAQTAAAAINVRTMK >Mature_334_residues AIYTRTGDKGTTALFTGQRVSKTHPRVETYGTLDELNAALSLCRCAVESPERRSLLEAVQLQIFWFSAELASESEQPSAQ QQSISAREIAELEAAIDHAMSRVPPVHSFILPGRSEAASRLHFARTLARRAERRLVELSEQFPVRNELQRYINRLSDCLY ALARAEDHENHQKNLIQEVTARYLAAVTTQTHKESAMSLSFQELHLLTRAAIARAEELHIPVVISVVDANGTESVTWRMP DALLVSSELAPKKAWTAVAMKMATHDLAAAVQPGASLYGLDTHMQGKVVTFGGGFPLWRDGSIVGGLGVSGGSVEQDMDI AQTAAAAINVRTMK
Specific function: Unknown
COG id: COG2096
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI16418349, Length=183, Percent_Identity=36.0655737704918, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI115534154, Length=177, Percent_Identity=29.3785310734463, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017858 - InterPro: IPR002779 - InterPro: IPR016030 - ProDom: PD007457 [H]
Pfam domain/function: PF01923 Cob_adeno_trans [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 36687; Mature: 36556
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYTRTGDKGTTALFTGQRVSKTHPRVETYGTLDELNAALSLCRCAVESPERRSLLEAV CEEEEECCCCCCEEEEECCHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH QLQIFWFSAELASESEQPSAQQQSISAREIAELEAAIDHAMSRVPPVHSFILPGRSEAAS HHHHEEEEHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHEECCCCHHHHH RLHFARTLARRAERRLVELSEQFPVRNELQRYINRLSDCLYALARAEDHENHQKNLIQEV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TARYLAAVTTQTHKESAMSLSFQELHLLTRAAIARAEELHIPVVISVVDANGTESVTWRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEC PDALLVSSELAPKKAWTAVAMKMATHDLAAAVQPGASLYGLDTHMQGKVVTFGGGFPLWR CCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCCC DGSIVGGLGVSGGSVEQDMDIAQTAAAAINVRTMK CCCEEECCCCCCCCCHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure AIYTRTGDKGTTALFTGQRVSKTHPRVETYGTLDELNAALSLCRCAVESPERRSLLEAV EEEEECCCCCCEEEEECCHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH QLQIFWFSAELASESEQPSAQQQSISAREIAELEAAIDHAMSRVPPVHSFILPGRSEAAS HHHHEEEEHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHEECCCCHHHHH RLHFARTLARRAERRLVELSEQFPVRNELQRYINRLSDCLYALARAEDHENHQKNLIQEV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TARYLAAVTTQTHKESAMSLSFQELHLLTRAAIARAEELHIPVVISVVDANGTESVTWRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEC PDALLVSSELAPKKAWTAVAMKMATHDLAAAVQPGASLYGLDTHMQGKVVTFGGGFPLWR CCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCCC DGSIVGGLGVSGGSVEQDMDIAQTAAAAINVRTMK CCCEEECCCCCCCCCHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA