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The map label for this gene is pduA [H]

Identifier: 218549341

GI number: 218549341

Start: 2061443

End: 2061727

Strand: Direct

Name: pduA [H]

Synonym: EFER_2008

Alternate gene names: 218549341

Gene position: 2061443-2061727 (Clockwise)

Preceding gene: 218549336

Following gene: 218549342

Centisome position: 44.92

GC content: 50.88

Gene sequence:

>285_bases
ATGCAACAAGAAGCATTAGGAATGGTAGAAACCAAAGGGTTAACCGCAGCAATTGAAGCGGCTGATGCCATGGTGAAGTC
TGCCAATGTGCTGCTGGTCGGCTACGAAAAAATCGGCTCAGGACTGATCACCGTAATCGTGCGTGGCGATGTCGGTGCAG
TAAAAGCAGCCACAGATGCAGGTTCTGCCGCCGCACGCAATGTAGGCGAAGTTAAAGCTGTTCACGTCATCCCACGCCCT
CACACCGACGTAGAAAAAATCTTACCGAAGGGAATTAACCCATGA

Upstream 100 bases:

>100_bases
CTTTGCCACTAATTTTTTCATTCCATCCTGCAAGTCAGCCATTCTTTTTCTTCGCCAGTTTTTATAGTTCATAGCATCGG
AAAAACCATGCGAGGTCTTT

Downstream 100 bases:

>100_bases
GTAGCAATGAACTGGTGGAACAGATCATGGCACAGGTAATCGCCCGCGTGGCGACGCCGGAACAAACGGTTACCCCTGAT
ACCCCACAAACCAAACGAGA

Product: propanediol utilization protein, polyhedral bodies (pduA-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLITVIVRGDVGAVKAATDAGSAAARNVGEVKAVHVIPRP
HTDVEKILPKGINP

Sequences:

>Translated_94_residues
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLITVIVRGDVGAVKAATDAGSAAARNVGEVKAVHVIPRP
HTDVEKILPKGINP
>Mature_94_residues
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLITVIVRGDVGAVKAATDAGSAAARNVGEVKAVHVIPRP
HTDVEKILPKGINP

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=90, Percent_Identity=64.4444444444444, Blast_Score=101, Evalue=8e-24,
Organism=Escherichia coli, GI87082105, Length=89, Percent_Identity=46.0674157303371, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 9600; Mature: 9600

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLITVIVRGDVGAVKAATDA
CCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCEEEEEEECCCCCEEECCCC
GSAAARNVGEVKAVHVIPRPHTDVEKILPKGINP
CCHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLITVIVRGDVGAVKAATDA
CCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCEEEEEEECCCCCEEECCCC
GSAAARNVGEVKAVHVIPRPHTDVEKILPKGINP
CCHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]