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The map label for this gene is 218549324

Identifier: 218549324

GI number: 218549324

Start: 2044040

End: 2044858

Strand: Direct

Name: 218549324

Synonym: EFER_1987

Alternate gene names: NA

Gene position: 2044040-2044858 (Clockwise)

Preceding gene: 218549323

Following gene: 218549325

Centisome position: 44.54

GC content: 47.99

Gene sequence:

>819_bases
ATGCGCTATAACATCAATGCCCGTTTCATTTATGACGCTACGGATGGCACGCTTACGCTACCGCAAAGCACGGAGCCAGA
CTGCCAACTCTCGGTAACGTCCAGCGCCCTGCTCAACTTTTTTTTGCATCATACCGATATCGTTAGTCGCGAAGAGGTAC
TGAAAAAAGTTTGGGATGACAACGGATTAACTTCTTCTAACAGCAATCTGAATCAGTATCTCAGTATGCTGCGCAAGACG
TTCCGTCACTATGGTATTGATAATATTATCATTACCGTTGCACGCGGCTATCTGCAGCTAAACCCGGATGTCTCCATCGA
ACCACTGGATGAAGCCCCTGCGCCACCTGCAATTATAGAGCCATTCCTAATCCCTGATGTTGACGCACCAACATCCAGTG
AGGATACCGAGTCTGCGCCATCAACATTAACGCCTGTCACCCATAGTCACGACGCTTACTGGTATTTTGCAGGTGCCTGT
TTGTTAACCATTTCGATTTTGTTGGTAGCCTTCAATTTGTTCGGTATCAGCGAGGCGCGCCCCATCGCGTTGACGCAACT
TTCTCATAGCCAGTGCGAATTACTGGCAAGCGACGAAATGCGCCGTTCAGTAAGCGTGAAGGCGTATGAGAAAAATTATG
ACGAAGTCCGTAAGCGTCTGAATATCGCCTGCAAACCAGGTGAGCGTTTTCTTTTTTTCTACGGTGACAGGCTGGAAACC
AACGGCCTTGGGCGAGTGTTCCTCGCGCACTGCGCTATGCATGAAGATAACCCGTTTAGTTATTGCGATAACTACTTTTA
TTACTCCTGGAAACCGTAA

Upstream 100 bases:

>100_bases
ACGGAAGGGATCACCATGAGCCCCGAACATCGTCAGGCACTGGTTGATTCACTGAATAAGATGACGCTTCCCGCGTGAAG
TCCCATGGATTGAGGTCGCG

Downstream 100 bases:

>100_bases
TGAGAATTGCACCGCGCACCTTCTTTGCTATTTCCGCCCTGACGTTTATCGTCGCCTCCGGGTTTAGTTTCTGGCGGTTG
TCCCCTGCTGAAAATACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulatory Protein C Terminal; Transcriptional Regulatory Protein; Regulatory Protein; Cholera xin Transcriptional Activator

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRYNINARFIYDATDGTLTLPQSTEPDCQLSVTSSALLNFFLHHTDIVSREEVLKKVWDDNGLTSSNSNLNQYLSMLRKT
FRHYGIDNIIITVARGYLQLNPDVSIEPLDEAPAPPAIIEPFLIPDVDAPTSSEDTESAPSTLTPVTHSHDAYWYFAGAC
LLTISILLVAFNLFGISEARPIALTQLSHSQCELLASDEMRRSVSVKAYEKNYDEVRKRLNIACKPGERFLFFYGDRLET
NGLGRVFLAHCAMHEDNPFSYCDNYFYYSWKP

Sequences:

>Translated_272_residues
MRYNINARFIYDATDGTLTLPQSTEPDCQLSVTSSALLNFFLHHTDIVSREEVLKKVWDDNGLTSSNSNLNQYLSMLRKT
FRHYGIDNIIITVARGYLQLNPDVSIEPLDEAPAPPAIIEPFLIPDVDAPTSSEDTESAPSTLTPVTHSHDAYWYFAGAC
LLTISILLVAFNLFGISEARPIALTQLSHSQCELLASDEMRRSVSVKAYEKNYDEVRKRLNIACKPGERFLFFYGDRLET
NGLGRVFLAHCAMHEDNPFSYCDNYFYYSWKP
>Mature_272_residues
MRYNINARFIYDATDGTLTLPQSTEPDCQLSVTSSALLNFFLHHTDIVSREEVLKKVWDDNGLTSSNSNLNQYLSMLRKT
FRHYGIDNIIITVARGYLQLNPDVSIEPLDEAPAPPAIIEPFLIPDVDAPTSSEDTESAPSTLTPVTHSHDAYWYFAGAC
LLTISILLVAFNLFGISEARPIALTQLSHSQCELLASDEMRRSVSVKAYEKNYDEVRKRLNIACKPGERFLFFYGDRLET
NGLGRVFLAHCAMHEDNPFSYCDNYFYYSWKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30841; Mature: 30841

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYNINARFIYDATDGTLTLPQSTEPDCQLSVTSSALLNFFLHHTDIVSREEVLKKVWDD
CEEECEEEEEEECCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCC
NGLTSSNSNLNQYLSMLRKTFRHYGIDNIIITVARGYLQLNPDVSIEPLDEAPAPPAIIE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCHHCC
PFLIPDVDAPTSSEDTESAPSTLTPVTHSHDAYWYFAGACLLTISILLVAFNLFGISEAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PIALTQLSHSQCELLASDEMRRSVSVKAYEKNYDEVRKRLNIACKPGERFLFFYGDRLET
CEEEEECCCHHHHHHHHHHHHHHCEEEHHHCCHHHHHHHCCEEECCCCEEEEEECCEECC
NGLGRVFLAHCAMHEDNPFSYCDNYFYYSWKP
CCCHHHHHHHHHCCCCCCHHHHCCCEEEEECC
>Mature Secondary Structure
MRYNINARFIYDATDGTLTLPQSTEPDCQLSVTSSALLNFFLHHTDIVSREEVLKKVWDD
CEEECEEEEEEECCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCC
NGLTSSNSNLNQYLSMLRKTFRHYGIDNIIITVARGYLQLNPDVSIEPLDEAPAPPAIIE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCHHCC
PFLIPDVDAPTSSEDTESAPSTLTPVTHSHDAYWYFAGACLLTISILLVAFNLFGISEAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PIALTQLSHSQCELLASDEMRRSVSVKAYEKNYDEVRKRLNIACKPGERFLFFYGDRLET
CEEEEECCCHHHHHHHHHHHHHHCEEEHHHCCHHHHHHHCCEEECCCCEEEEEECCEECC
NGLGRVFLAHCAMHEDNPFSYCDNYFYYSWKP
CCCHHHHHHHHHCCCCCCHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA