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The map label for this gene is 218549303

Identifier: 218549303

GI number: 218549303

Start: 2013881

End: 2015314

Strand: Reverse

Name: 218549303

Synonym: EFER_1965

Alternate gene names: NA

Gene position: 2015314-2013881 (Counterclockwise)

Preceding gene: 218549304

Following gene: 218549302

Centisome position: 43.92

GC content: 58.86

Gene sequence:

>1434_bases
ATGGATTTACGTAACCCGGATACCTGGATTTCGCACCTGCTGGAAAACCTGCCGGAAGAGAAACTGGCTTCGGCGTTGAA
AGATGACAACCCGGACTGGGAGTATATCGACGGTGGGATTGTCAAACTGGGATCGCTGGCGCACAGCCAACTGGATATCC
CTGAACTCCAGCACCGGGGGCTGGTCCTTCTGGCTTCGGAGAGTAAGGATTTTCGCCTGCTGGCGCATCTGCTGAGAACC
CTGCAACATGCCGGTGATCCGCTCCTGGCCTTGCGCCTGCTGGCTCTGTATGTCGAACATTACTGGGCGGTGGCTGCGCC
GCAGAATATAGCGCATAAAAAACGCTTTGCCAGTCAGGTGATAAAACGTTTTGAGGCGGGCGTCACGTCTTTTGCGGAAA
GTGCAGCCACGGCACAGCGCGATGCGCTGCTGGGGGAACTGGCGAAGTTGGCGCAGTGCTGGCAGGCACACAACGCGCCG
GAGCTGGCCAAGGCTACAGACGATTTATTTGCCTTGTTTCAGCGCGCGTTTCGTGATGTAGCGCCTGAAACGTCGTCATC
TGCACGTACCGCCGCCAGTGCGCCGCAGGCCACGAGCGGAGCTGTACCGGATATGTCACCGCACACGGCTGCCGCTCAGC
CTTCTGTTGCAGCTACTCCAATCCCGCAGGTCATCGTTGACAGCCACGACGATAAAGCCTGGCGCGACACGCTGTTAAAA
GTGGCTGCCATTTTATGTGAACGCCAGCCGGACTCACCGCAGGGCTATCGCCTGCGCCGCCATGCACTGTGGCAGAACAT
CACCAGCACACCCCAGGTGGAAAGCGATGGCCGTACCCCACTGGCTGCGGTTTCTGCCGATATGGTGTCGGATTATCAGT
CCCGGCTTGCCAGCGCGGATATGACGCTGTGGCAGCAGGTGGAGAAAAGCGTACTGCTGGCACCTTACTGGCTGGATGGT
CACTGCCTTTCGGCACAGACGGCACAGCGTCTGGGCTACAAACAGGTGGCAGACGCCATCCGCGATGAGCTCACCCGCTT
TCTTGAGCGTCTGCCCCAGCTTACCGGGCTGCTGTTTAATGACCGCACACCGTTTATCAGTGAGCAGACGAAACAATGGT
TGTCCGCTTCGCCCGACGGCAAAGTGGCACCGATTGCGCAGACCGGTGAGGAATCGCAGGCGGCCAGGACCTGTTTTGCC
GAACAGGGGCTGGAGGCGGCGCTGCGGTATCTGGACATGCTACCCGAAGGCGATCCCCGCGATCAGTTTCACCGCCAGTT
CCTTGCCGCCCAGTTGACGGAAGAGGCAGGGCTGGTACAGCTTGCGCAGCAACAGTACCGGATGTTGTTGATGATGGGGG
GGCAGACGATGGTGGCCGACTGGGAGCCATCGTTACTTGCGCAGCTTGAACAAAAATTCACGGCAGAACAATAA

Upstream 100 bases:

>100_bases
GCGCAGACAACGCCGCCGGAAAGCTGACCTTTAACATTGACGGGCTGGCAAGGGATATTGCTCCCCTGCGCGATGCCTGC
CACTGGGCGGGAGAATAAAG

Downstream 100 bases:

>100_bases
AAGAGAACAGGAGTTTTTGTGTTCAGATTACCAACACCCCGACTATTCAGCGGACTCAAATCAGTCCTGCGCCCGGCGAT
GCCCCGGTTTAAGGTTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Protein ImpA; Type VI Secretion-Associated Protein Family; ImpA-Like; ImpA N-Terminal; ImpA-Related Domain-Containing Protein; ImpA-Like Protein

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MDLRNPDTWISHLLENLPEEKLASALKDDNPDWEYIDGGIVKLGSLAHSQLDIPELQHRGLVLLASESKDFRLLAHLLRT
LQHAGDPLLALRLLALYVEHYWAVAAPQNIAHKKRFASQVIKRFEAGVTSFAESAATAQRDALLGELAKLAQCWQAHNAP
ELAKATDDLFALFQRAFRDVAPETSSSARTAASAPQATSGAVPDMSPHTAAAQPSVAATPIPQVIVDSHDDKAWRDTLLK
VAAILCERQPDSPQGYRLRRHALWQNITSTPQVESDGRTPLAAVSADMVSDYQSRLASADMTLWQQVEKSVLLAPYWLDG
HCLSAQTAQRLGYKQVADAIRDELTRFLERLPQLTGLLFNDRTPFISEQTKQWLSASPDGKVAPIAQTGEESQAARTCFA
EQGLEAALRYLDMLPEGDPRDQFHRQFLAAQLTEEAGLVQLAQQQYRMLLMMGGQTMVADWEPSLLAQLEQKFTAEQ

Sequences:

>Translated_477_residues
MDLRNPDTWISHLLENLPEEKLASALKDDNPDWEYIDGGIVKLGSLAHSQLDIPELQHRGLVLLASESKDFRLLAHLLRT
LQHAGDPLLALRLLALYVEHYWAVAAPQNIAHKKRFASQVIKRFEAGVTSFAESAATAQRDALLGELAKLAQCWQAHNAP
ELAKATDDLFALFQRAFRDVAPETSSSARTAASAPQATSGAVPDMSPHTAAAQPSVAATPIPQVIVDSHDDKAWRDTLLK
VAAILCERQPDSPQGYRLRRHALWQNITSTPQVESDGRTPLAAVSADMVSDYQSRLASADMTLWQQVEKSVLLAPYWLDG
HCLSAQTAQRLGYKQVADAIRDELTRFLERLPQLTGLLFNDRTPFISEQTKQWLSASPDGKVAPIAQTGEESQAARTCFA
EQGLEAALRYLDMLPEGDPRDQFHRQFLAAQLTEEAGLVQLAQQQYRMLLMMGGQTMVADWEPSLLAQLEQKFTAEQ
>Mature_477_residues
MDLRNPDTWISHLLENLPEEKLASALKDDNPDWEYIDGGIVKLGSLAHSQLDIPELQHRGLVLLASESKDFRLLAHLLRT
LQHAGDPLLALRLLALYVEHYWAVAAPQNIAHKKRFASQVIKRFEAGVTSFAESAATAQRDALLGELAKLAQCWQAHNAP
ELAKATDDLFALFQRAFRDVAPETSSSARTAASAPQATSGAVPDMSPHTAAAQPSVAATPIPQVIVDSHDDKAWRDTLLK
VAAILCERQPDSPQGYRLRRHALWQNITSTPQVESDGRTPLAAVSADMVSDYQSRLASADMTLWQQVEKSVLLAPYWLDG
HCLSAQTAQRLGYKQVADAIRDELTRFLERLPQLTGLLFNDRTPFISEQTKQWLSASPDGKVAPIAQTGEESQAARTCFA
EQGLEAALRYLDMLPEGDPRDQFHRQFLAAQLTEEAGLVQLAQQQYRMLLMMGGQTMVADWEPSLLAQLEQKFTAEQ

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52825; Mature: 52825

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRNPDTWISHLLENLPEEKLASALKDDNPDWEYIDGGIVKLGSLAHSQLDIPELQHRG
CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCC
LVLLASESKDFRLLAHLLRTLQHAGDPLLALRLLALYVEHYWAVAAPQNIAHKKRFASQV
EEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IKRFEAGVTSFAESAATAQRDALLGELAKLAQCWQAHNAPELAKATDDLFALFQRAFRDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
APETSSSARTAASAPQATSGAVPDMSPHTAAAQPSVAATPIPQVIVDSHDDKAWRDTLLK
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHH
VAAILCERQPDSPQGYRLRRHALWQNITSTPQVESDGRTPLAAVSADMVSDYQSRLASAD
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MTLWQQVEKSVLLAPYWLDGHCLSAQTAQRLGYKQVADAIRDELTRFLERLPQLTGLLFN
HHHHHHHHHHHEECCEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHC
DRTPFISEQTKQWLSASPDGKVAPIAQTGEESQAARTCFAEQGLEAALRYLDMLPEGDPR
CCCCCHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DQFHRQFLAAQLTEEAGLVQLAQQQYRMLLMMGGQTMVADWEPSLLAQLEQKFTAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLRNPDTWISHLLENLPEEKLASALKDDNPDWEYIDGGIVKLGSLAHSQLDIPELQHRG
CCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCC
LVLLASESKDFRLLAHLLRTLQHAGDPLLALRLLALYVEHYWAVAAPQNIAHKKRFASQV
EEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IKRFEAGVTSFAESAATAQRDALLGELAKLAQCWQAHNAPELAKATDDLFALFQRAFRDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
APETSSSARTAASAPQATSGAVPDMSPHTAAAQPSVAATPIPQVIVDSHDDKAWRDTLLK
CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHH
VAAILCERQPDSPQGYRLRRHALWQNITSTPQVESDGRTPLAAVSADMVSDYQSRLASAD
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MTLWQQVEKSVLLAPYWLDGHCLSAQTAQRLGYKQVADAIRDELTRFLERLPQLTGLLFN
HHHHHHHHHHHEECCEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHC
DRTPFISEQTKQWLSASPDGKVAPIAQTGEESQAARTCFAEQGLEAALRYLDMLPEGDPR
CCCCCHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DQFHRQFLAAQLTEEAGLVQLAQQQYRMLLMMGGQTMVADWEPSLLAQLEQKFTAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA