| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549299
Identifier: 218549299
GI number: 218549299
Start: 2007604
End: 2008275
Strand: Reverse
Name: 218549299
Synonym: EFER_1961
Alternate gene names: NA
Gene position: 2008275-2007604 (Counterclockwise)
Preceding gene: 218549300
Following gene: 218549298
Centisome position: 43.77
GC content: 39.73
Gene sequence:
>672_bases ATGTCTGAAATGAAAAAGTATTTGCAAAAATATGATAACTTTAACTCAGATCTGTGCCCGGACTGGATATGGATAAAATC GATGTTATGGACAGAAGGTAATCCTGAGGAATTTGAAGATGAATGGGAACACAGGCCGCTCCGCATTGGAGTCGCTGGAG ATGCGGGTGCACCCGCATTGCTCAATAAAGATGAAGCCATCAGTCTGGTCATTCCTACTGGTGCGGAATGGCAAAATTTA ACATTAAGTAAAATTACTAATGATCCATATTCAAATATTAGAGCAGCAATTATATATTTAATGAATAAATTGAGTCTCTC GGATCAAATATCTGTTGATGATCCGAATGATAAAACCATTTATACAGTAAAAGTATCTACAGCTGATGGTCACGGTACTA TGGATGCAATTGCTCTTGACAGGCGTCGAATAGGTACAACAAAGGAGATTCTGGAGAGGGAGAATCCTGGTGTTAATCCA ACCAGACTACATAATGGCCAGGAGTTGAGATACTGTAAGGGGAGTAAGCAGCGGGTTATTTTTGGATGGCGATTTCCTGT AAATGCTAAAATTATTGCACAACAATACAATGGTGGTGGAGATGCAGCTTATGAGGCAAAGGTAGACTATGTGCATTCTT TATTGTCAGGCTCTATGGGGCGTGAAAAATAA
Upstream 100 bases:
>100_bases TAACCGCAGAGGAAAAATTTGCTATTTGGAAAAAAGCAAGGAAAGATGCTTATGATGAAAAAAAAGAAATATGGAATAAA TATGATTCATTCAGCAAGCT
Downstream 100 bases:
>100_bases TGGCCAGTCTTTTTAAATTTTTACGGGTGTTATTATTCATTGTCATTTTTTTTATGATCGGCAGAGTATATGCTAACACC AGTTACTATAGTAGCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSEMKKYLQKYDNFNSDLCPDWIWIKSMLWTEGNPEEFEDEWEHRPLRIGVAGDAGAPALLNKDEAISLVIPTGAEWQNL TLSKITNDPYSNIRAAIIYLMNKLSLSDQISVDDPNDKTIYTVKVSTADGHGTMDAIALDRRRIGTTKEILERENPGVNP TRLHNGQELRYCKGSKQRVIFGWRFPVNAKIIAQQYNGGGDAAYEAKVDYVHSLLSGSMGREK
Sequences:
>Translated_223_residues MSEMKKYLQKYDNFNSDLCPDWIWIKSMLWTEGNPEEFEDEWEHRPLRIGVAGDAGAPALLNKDEAISLVIPTGAEWQNL TLSKITNDPYSNIRAAIIYLMNKLSLSDQISVDDPNDKTIYTVKVSTADGHGTMDAIALDRRRIGTTKEILERENPGVNP TRLHNGQELRYCKGSKQRVIFGWRFPVNAKIIAQQYNGGGDAAYEAKVDYVHSLLSGSMGREK >Mature_222_residues SEMKKYLQKYDNFNSDLCPDWIWIKSMLWTEGNPEEFEDEWEHRPLRIGVAGDAGAPALLNKDEAISLVIPTGAEWQNLT LSKITNDPYSNIRAAIIYLMNKLSLSDQISVDDPNDKTIYTVKVSTADGHGTMDAIALDRRRIGTTKEILERENPGVNPT RLHNGQELRYCKGSKQRVIFGWRFPVNAKIIAQQYNGGGDAAYEAKVDYVHSLLSGSMGREK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25166; Mature: 25034
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMKKYLQKYDNFNSDLCPDWIWIKSMLWTEGNPEEFEDEWEHRPLRIGVAGDAGAPAL CHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCE LNKDEAISLVIPTGAEWQNLTLSKITNDPYSNIRAAIIYLMNKLSLSDQISVDDPNDKTI ECCCCEEEEEECCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCEE YTVKVSTADGHGTMDAIALDRRRIGTTKEILERENPGVNPTRLHNGQELRYCKGSKQRVI EEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHEECCCCEEEEECCCCCEEE FGWRFPVNAKIIAQQYNGGGDAAYEAKVDYVHSLLSGSMGREK EEEECCCCEEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEMKKYLQKYDNFNSDLCPDWIWIKSMLWTEGNPEEFEDEWEHRPLRIGVAGDAGAPAL HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCE LNKDEAISLVIPTGAEWQNLTLSKITNDPYSNIRAAIIYLMNKLSLSDQISVDDPNDKTI ECCCCEEEEEECCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCEE YTVKVSTADGHGTMDAIALDRRRIGTTKEILERENPGVNPTRLHNGQELRYCKGSKQRVI EEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHEECCCCEEEEECCCCCEEE FGWRFPVNAKIIAQQYNGGGDAAYEAKVDYVHSLLSGSMGREK EEEECCCCEEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA